Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02080 ATGGATATGTACATTCGTGTTAAACGTAGTAAGACAACCTACTTCATCCGGTGCAAGCCATCTGATAAAATTCTTGACATAAAGCAGAAGTTGCAAGAACTTGTTGATCAGCCAGCTAATAATCAACGGTTAATTCTACCTGGTACAGGGGAAGTATTAGAAGACTCTAAGACACTGGCAGATCAAAAGGTTGAAAATGATGCTGTTGTAGCACTGACCTTGAGAAAAGATATAGGAGTCTTTCCTTGTGTGTTTGAGGTGATCTTCACAATCATGCAGCTGATGATAATGAGTTTGAGGAGGTCAACATTGTCCGGCCAAATGATTTCTACCAAGCTCGGGATGCGGATGGTGCCAATTGGTAAAGCCATACTCCAACAATGGTTGGCTCACAATTACTGGTACTCTGCCCATGGAGTCATTGATAGATATTATTGTAACAACTTAAATGAAACTTCCATGTTATTATGA 471 0.3992 MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKDIGVFPCVFEVIFTIMQLMIMSLRRSTLSGQMISTKLGMRMVPIGKAILQQWLAHNYWYSAHGVIDRYYCNNLNETSMLL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02080 156 SMART ubq_7 3 75 IPR000626 GO:0005515
Pumo2g02080 156 Gene3D - 1 86 - -
Pumo2g02080 156 SUPERFAMILY Ubiquitin-like 1 81 IPR029071 -
Pumo2g02080 156 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Pumo2g02080 156 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Pumo2g02080 156 PANTHER OS03G0364000 PROTEIN 1 81 - -
Pumo2g02080 156 CDD Ubl_ubiquitin_like 5 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02080 1 132 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 27.273 2.36e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02080 K03873 - gmx:100499885 150.214