Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02062 ATGCAGCAAGGTGATTCAACGGTCCTAAGCTTGAGGCCTGGTGGTGGTCGTGGCGGCGGCGGAAGCAGGCTTTTCGCTCACTCCTCCTCCTCCTCCGCCGCTCTCACCGCCGATCTCCCTCTCTCGCGCCCTAATGCCTCTTTCTCTCTCAAGACTGGAGATTCACGGTTTGAGGGTCATGAGCGTGTGCGATATACCAGAGATAAGCTTTTACAGCTTCGAGAGGCTGTTGAGGTTCCCGATGATATTCTAAAGATTAAACAAGATATAGAAGGTGAACTTTTTGGTGAAGATCAAAGTTGGAGCCGTGCTGAAAGCAATCTTCCTCATCAATTACAAAATCGGTATTCTGAGCCAGATAACCGTGATTGGCGTGGTCGTTCTGGACAACTTCCTGCTAATCCAGATGAGAGGTCTTGGGAAAACCTTAGAGATAACAGGGAGTTTGGTAATAGACAGCAGGATGCTAGTCAGGTTAATCGCCAAGACCAACTTAATTCCCAGTTTGCAAGGACACAAATCTCTTCTACCCAAGGGGCAAGTATTGGAAGAAATAAATATCATTACTGTCTATTTATTCAGGGACCTACTCCTACGCTAGTCAAGGCTGAGGTTCCATGGTCAGCCAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTGACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACATCAGCTGACATCTTGAAGGATGTCATTTTGCTTATTTTTGATAAGGCTGTTCTGGAACCAACATTTTGCCCCATGTATGCTCAGTTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAGGAAACTGGTGGGAAAGAAATCACCTTTAAGAGAGTACTCTTGAATATTTGCCAGGAGGCATTTGAAGGTGCTGAAAATCTGAGGGAGGAACTAAAAAGGATGACTGCACCTGAGCAGGAGATGGAGCGTATGGACAAGGAAAGGCTGCTCAAGCTTCGTACCCTTGGAAATATCCGTTTAATTGGTGAACTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGATCCCCAGACAGCAAGTCTTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCGCGTCGTATAAATGATATTTACTTTAGCCGATTGAAAGAATTGAGCTCAAACCTACAACTTGTACCCCGACTTAGGTTCATGATTCGCGATGTTATAGAGTTGCGTGCTAGTAACTGGGTTCCTAGACGGGAAGAGGTCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAAACTCTTGGTTTGCGGCCAGGTGCCACTGCAAGTATGAGAAATCCCCGTGGCGGTGTTCAAGGAAATGCCAGCTCTGGTGGCTTTCCTATTGCCCGACCTGGTGCAGGGGGTTTGATGCCTGGAATGCCAGGAACCAGGAAGATGCCTGGGATGCCTGGTTTTGATAATGACAACTGGGAGATGCCTAAGACTAGATCTATGCCAAGAGGAGATATGTCAGGTGTTCAAGCTGCTGGACGCAGCAACTCTGCATTACTTTCCAAGTCCACAACCATCAATTCAAAACTGCTACCTCAAGGTAGTGGTGGTATTATAAGTGGAAGAAATAGTGCCCTAGTACATGGAGGTGGTACATTTTCTGCTCGCCCGGCAAACTTTGGTTTAGCTCCTGAGGCAGCACCTCAACTCTCTTCACCTGCTAAAACAGTTGCTCCTGTTCCTGTATCCTCTGAGAAGCCACAACCTCCAGCTGCAAGATTGAATACTGATGATCTTCGCCGCAGAACTGTCTCTCTTCTAGAAGAATATTTCGGTGTTCGGCTTTTGGAAGAGGCATTACAGTGTGTGGAGGAATTAAAAGCTCCTTCTTACCACCCTGAGGTTGTTAAGGAAGCCGTTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTTGCCAATCTCATCGAGTATCTGTATATTAAGAAGATTCTTACCCCTACAGACATAGGGACTGGCTGTTTGTTGTTTGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCTGGAGGGTTGGATTTTAAGGTGGTGAGAGAGATTCTCAAGAAGGTGGATGATGACATGTTCCAGAGAGCAATATTTGACAGTGCGGTCGGGGCCGTTAGATCATCTGCATCCGGGCAAGCCGTGTTGGATTCACATACATCTGATGTTGACGCCTGCCAGAACCTGCTCAAGTGA 2400 0.4542 MQQGDSTVLSLRPGGGRGGGGSRLFAHSSSSSAALTADLPLSRPNASFSLKTGDSRFEGHERVRYTRDKLLQLREAVEVPDDILKIKQDIEGELFGEDQSWSRAESNLPHQLQNRYSEPDNRDWRGRSGQLPANPDERSWENLRDNREFGNRQQDASQVNRQDQLNSQFARTQISSTQGASIGRNKYHYCLFIQGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVILLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEETGGKEITFKRVLLNICQEAFEGAENLREELKRMTAPEQEMERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSSNLQLVPRLRFMIRDVIELRASNWVPRREEVKAKTITEIHSEAEKTLGLRPGATASMRNPRGGVQGNASSGGFPIARPGAGGLMPGMPGTRKMPGMPGFDNDNWEMPKTRSMPRGDMSGVQAAGRSNSALLSKSTTINSKLLPQGSGGIISGRNSALVHGGGTFSARPANFGLAPEAAPQLSSPAKTVAPVPVSSEKPQPPAARLNTDDLRRRTVSLLEEYFGVRLLEEALQCVEELKAPSYHPEVVKEAVSLALDKSPPCVEPVANLIEYLYIKKILTPTDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVVREILKKVDDDMFQRAIFDSAVGAVRSSASGQAVLDSHTSDVDACQNLLK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02062 799 ProSiteProfiles MI domain profile. 633 755 IPR003891 -
Pumo2g02062 799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 45 796 IPR045208 GO:0003743
Pumo2g02062 799 Coils Coil 306 326 - -
Pumo2g02062 799 Gene3D - 212 448 - -
Pumo2g02062 799 SMART ma3_7 634 746 IPR003891 -
Pumo2g02062 799 MobiDBLite consensus disorder prediction 612 631 - -
Pumo2g02062 799 SUPERFAMILY ARM repeat 628 788 IPR016024 -
Pumo2g02062 799 Pfam MIF4G domain 221 447 IPR003890 GO:0003723|GO:0005515
Pumo2g02062 799 Pfam MA3 domain 634 746 IPR003891 -
Pumo2g02062 799 SMART if4_15 221 447 IPR003890 GO:0003723|GO:0005515
Pumo2g02062 799 MobiDBLite consensus disorder prediction 104 138 - -
Pumo2g02062 799 Gene3D - 627 794 - -
Pumo2g02062 799 SUPERFAMILY ARM repeat 215 450 IPR016024 -
Pumo2g02062 799 MobiDBLite consensus disorder prediction 1 25 - -
Pumo2g02062 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 212 448 - -
Pumo2g02062 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 627 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02062 Pumo-Chr2 40551917 40557694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02062 1 797 Eukaryotic Initiation Factors Gene Family AT5G57870 62.485 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02062 K03260 - gmx:100800438 1365.13