Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02056 ATGATGGCATCATCACAAACCAAGGCCCATGATCATCTCTTCTTGTTCTTCTTCTTCTTCCTGTGCTTATTAATCTTTTCAAATTTCCCATGCATTGTTGCTGCTGCTGTGCCAAAAGAGCAAGAACAAGATCGAATCTCCTCTCTCCCGGGGCAGCCACCAGTGACATTTTCTCAGTTCTCTGGCTATGTCACTGTCAACGAGCAACATGGTAGAGCACTCTTCTACTGGTTCATTGAGGCCACCACTTCCCCCGAGAATAAACCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGCTCATCGGTGGCCTACGGAGCATCAGAGGAAATTGGACCATTCCGTATAAACAAAACTGGCACTTCTCTATACCTTAACAAATATGCATGGAATAGAGAAGCAAATGTCCTCTTTGTTGAATCGCCTGCTGGTGTTGGTTTCTCATACACAAATACCAGTTCTGACCTCAAAACTTCTGGGGACAAAAGGACAGCTCAGGATGCTCTCATTTTTCTAATTAGATGGGTGGCAAGATTTCCACAATATAAATATAGAGACTTTTACATTGCTGGGGAGAGCTATGCAGGGCATTATGTCCCCCAGTTGGCTAAGAAAGTCCACGATTATAACAAAAAAAATCCACACATCCTTAATCTTAAGGGGTTCATTGTGGGAAATGCTGTGACTGATGACCACTACGATGGGGTTGGAACTGTCACGTATTGGTGGAGCCACTCTATGATATCCGATCAATCATACAAATCAATCCTCAAATACTGTAATTTCGCCGAAAGGAACACGAGTAAAAAATGTGATGATGCAGTGAGTTATGCCGTTAACAATGAATTTGGAAACATTGATCATTACAGTATCTATACCCCTTCGTGCACAACAACATCACAAAATGATACTACTAGTGTGAGGCAATATGCTAGATTGTTCAAGAGTACAATTTTGCATAGGATTTCTGGGTATGATCCGTGCACTGAAAATTATGCAGAGAAATACTATAACCGTCGTGATGTGCAGAAAGCATTGCATGCAAATGTTACCAACATTCCTTACAAATGGACTTCTTGCAGTGATGTGCTCAATAAACATTGGAAAGATTCTGAATTTTCTATATTGCCCATTTACAAAGAGTTAATTGCAGCGGGTCTGAGAATCTGGGTTTTCAGTGGGGACACGGATTCAGTGGTTCCAGTAACTGCCACTAGGTTTTCTCTCAGCCATCTCAACCTCTCCATCAAAACTCGTTGGTATCCATGGTACTCAAATGGCCAGGTAGGAGGATGGACAGAGGTGTATGATGGATTAACCTTTGCAACAGTGAGAGGAGCTGGGCATGAAGTACCATTGTTTCAACCAGAGAGAGCTTACATACTTTTCAGGTCCTTTTTGGCAGGGAAAAAGCTACCAAAATCTTGA 1428 0.4244 MMASSQTKAHDHLFLFFFFFLCLLIFSNFPCIVAAAVPKEQEQDRISSLPGQPPVTFSQFSGYVTVNEQHGRALFYWFIEATTSPENKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGTSLYLNKYAWNREANVLFVESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWVARFPQYKYRDFYIAGESYAGHYVPQLAKKVHDYNKKNPHILNLKGFIVGNAVTDDHYDGVGTVTYWWSHSMISDQSYKSILKYCNFAERNTSKKCDDAVSYAVNNEFGNIDHYSIYTPSCTTTSQNDTTSVRQYARLFKSTILHRISGYDPCTENYAEKYYNRRDVQKALHANVTNIPYKWTSCSDVLNKHWKDSEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLSHLNLSIKTRWYPWYSNGQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAYILFRSFLAGKKLPKS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02056 475 Gene3D alpha/beta hydrolase 40 298 IPR029058 -
Pumo2g02056 475 FunFam Carboxypeptidase 40 298 - -
Pumo2g02056 475 SUPERFAMILY alpha/beta-Hydrolases 36 473 IPR029058 -
Pumo2g02056 475 FunFam Carboxypeptidase 375 469 - -
Pumo2g02056 475 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Pumo2g02056 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 Pfam Serine carboxypeptidase 51 468 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 456 IPR001563 GO:0004185|GO:0006508
Pumo2g02056 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 439 456 IPR033124 GO:0004185
Pumo2g02056 475 Gene3D - 328 365 - -
Pumo2g02056 475 Gene3D - 375 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02056 Pumo-Chr2 40330440 40341285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02056 333 472 Calmodulin-binding Proteins AT2G22960 32.624 3.45e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02056 K16297 - gmx:100785391 802.357