Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02036 ATGGGTTTGGGAGTGTTTGGTTCTGTTCTAGTTCTGACACTCTTCTTCAAGCACTTGGCATCTCAGCAACCAAACACTGATGATTTTTTTGTGTCTGAGTTCTTGAAGAAGATGGGTTTAGCATCCTCCAAGGTCCACAACTCTTCTGCTTCTGTTTGTTCATGGAAAGGGGTTTCATGTGATGCCAAGAGAGAACATGTTGTTGGGTTAGTCTTTTCTGGCATGGGCCTCTCTGGTCCTATTCCAGATACCACCATTGGCAAGCTCAGCAAGCTTCAATCTTTGGACCTTAGCCACAACAAAATCACTGACTTGCCTTCTGATTTCTGGAGTTTTAGCTTGCTCAAGAGCCTCAACCTCTCCTCCAATCAGATTTCTGGCTCATTGACTAACAACATTGGAAACTTTGGCTTGCTAGAAGTGTTTGACATGTCCAGCAACAATTTCTCTGGGGAAATTCCTGAAGCTATTAGTTCCCTCATGAGTCTGAAGGTCCTCAAACTTGACCACAACAGGTTTGAGCAAAGAATACCTTCTGGGATTCTCAAGTGCCACTCTCTAGTTTCAATTGATCTTTCTTCAAATCAGTTGAATGGGACAGTTCCAGATGGCTTTGGTGATGCTTTTCCTAACCTCATTAACTTGAACCTTGCTGGGAATAGTATTAATGGCAGTGATTCAGATATTTCTGGGTTGAAGTCCATTGTGAGTCTCAACATATCAGGCAATTCCTTTCAGGGTTCTGTGATGAGTTTGTTTCATGGAAGGCTTGAGGTCATGGACCTTAGCAGAAACCAATTTGAAGGTCACATTTCTCAGGTGCATTCCATCTCTAACTACAATTGGTCTCATTTAGTTTATCTGGATTTGTCAGAGAATCAGCTAGGTGGGGAGATTTTCCAAAATTTGAATGAATCCAAGAATCTAAAGCACCTTAATCTTGCTCACAATAGATTTAGCAGACAGAAATTCCCCAAGATTGAAATGCTCTCAGGATTGGAATATCTGAACTTGTCCAAAACTAGTCTGATTGGTCACATTCCTGCTGAAATCTCACAACTTAGTAATTTGAGTGCACTTGATGTTTCTATGAATCATCTTATAGGGCAAATCCCTTTACTAAGCAATAAAAACCTCCAAGTTCTTGACCTTTCAAACAACAATTTGAGTGGAGATATCCCTTCATCAGTCATAGAGAAACTTCCCTTAATGGAGAAATACAACTTCTCTTATAATAACTTAACCTTCTGTGCTTTGGAAATCAAACCAGCTATCCTCCAAGCAGCATTCTATGGATCAGTAAACAGTTGCCCAATTGCTGCAAACCCAAGTCTTCTCAAAAAAAGAGCCAATCAAGATAAGGGAATGAAGCTAGCTCTGGGATTGACCCTCTCAATGATCTGCTTGATTGCTGGGCTTTTGCTTCTAGCATTTGGTTGCCTTAAGAAAACAAAACCATGGCCTGTTAAGCAAACTTCATACAAAGAAGAACATAACATTTCAGGTCCCTTTTCATTCCACACTGATTCAACCACTTGGGTGGCTGATGTTAAGCAAGCAACATCTGTCCCAGTAGTAATCTTTGACAAGCCACTGTTAAATATTACATTTGCAGACCTATTGGCTGCAACTTCAAATTTTGATAGGGGTACCCTTTTGGCTGAAGGAAAATTTGGGCCTGTTTATAGAGGTTTTCTACCTGGTGGTATTCATGTAGCAGTTAAAGTTCTGGTGGTTGGATCTACTCTGACAGATAAAGAAGCTGCAAGAGAGCTTGAGTATCTTGGTAGAATCAAGCACCCCAATCTTGTTCCTCTAACTGGATATTGTGTAGCTGGGGATCAGAGGATTGCCATATATGACTACATGGAGAATGGGAACTTGCAAAATTTGCTTTATGACTTGCCACTTGGGGTACTACAAAGGACAGATGATTGGAGCACAGATACATGGGAAGAGGATGACAGTAATGGGATTCAAAATGCAGGATCAGAAGGAGTGCTCACAACTTGGAGATTTCGCCATAAAATCGCACTCGGCACTGCCAGAGCATTGGCATTTCTGCATCATGGATGCTCCCCGCCAATCATTCACAGAGATGTTAAAGCTAGCAGTGTGTATTTGGATTATAACTTGGAGCCAAGATTGTCAGATTTTGGACTGGCTAAGATTTTTGGAAGTGGCTTGGATGAGGAGATTTCACTTTGTTCACCAGGTTATGTTCCACCAGAGTTTTCTCAAGCAGAATTTGACACCTCAACTCCAAAATCCGATGTGTACTGTTTTGGGGTCGTTCTCTTTGAGCTACTAACTGGAAAGAAGCCAGTTGAAGATGATTATCCTGATGAGAAAGAAGCAACTTTGGTTAGTTGGGTCAGAGGACTAGTGAGAAAGAACAAAGCTTCAAGAGCTATTGATCCAAAAATTCGCGATACCGGAGCAGAAAAGCAAATGGAGGAGGCCCTTAAGATTGGTTATCTTTGCACTGCTGACCTTCCTTCCAAGCGACCAAGCATGCAGCAGATAGTTGGACTCCTTAAAGATATTGAACCTTCAGCTAATTAG 2565 0.4148 MGLGVFGSVLVLTLFFKHLASQQPNTDDFFVSEFLKKMGLASSKVHNSSASVCSWKGVSCDAKREHVVGLVFSGMGLSGPIPDTTIGKLSKLQSLDLSHNKITDLPSDFWSFSLLKSLNLSSNQISGSLTNNIGNFGLLEVFDMSSNNFSGEIPEAISSLMSLKVLKLDHNRFEQRIPSGILKCHSLVSIDLSSNQLNGTVPDGFGDAFPNLINLNLAGNSINGSDSDISGLKSIVSLNISGNSFQGSVMSLFHGRLEVMDLSRNQFEGHISQVHSISNYNWSHLVYLDLSENQLGGEIFQNLNESKNLKHLNLAHNRFSRQKFPKIEMLSGLEYLNLSKTSLIGHIPAEISQLSNLSALDVSMNHLIGQIPLLSNKNLQVLDLSNNNLSGDIPSSVIEKLPLMEKYNFSYNNLTFCALEIKPAILQAAFYGSVNSCPIAANPSLLKKRANQDKGMKLALGLTLSMICLIAGLLLLAFGCLKKTKPWPVKQTSYKEEHNISGPFSFHTDSTTWVADVKQATSVPVVIFDKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDKEAARELEYLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVLQRTDDWSTDTWEEDDSNGIQNAGSEGVLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSGLDEEISLCSPGYVPPEFSQAEFDTSTPKSDVYCFGVVLFELLTGKKPVEDDYPDEKEATLVSWVRGLVRKNKASRAIDPKIRDTGAEKQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPSAN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02036 854 SMART LRR_typ_2 112 136 IPR003591 -
Pumo2g02036 854 SMART LRR_typ_2 160 184 IPR003591 -
Pumo2g02036 854 SMART LRR_typ_2 89 111 IPR003591 -
Pumo2g02036 854 SMART LRR_typ_2 209 232 IPR003591 -
Pumo2g02036 854 SMART LRR_typ_2 377 400 IPR003591 -
Pumo2g02036 854 SMART LRR_typ_2 330 354 IPR003591 -
Pumo2g02036 854 Gene3D Ribonuclease Inhibitor 179 279 IPR032675 -
Pumo2g02036 854 Gene3D Ribonuclease Inhibitor 280 375 IPR032675 -
Pumo2g02036 854 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Pumo2g02036 854 Pfam Leucine rich repeat 81 125 IPR001611 GO:0005515
Pumo2g02036 854 PRINTS Leucine-rich repeat signature 354 367 - -
Pumo2g02036 854 PRINTS Leucine-rich repeat signature 92 105 - -
Pumo2g02036 854 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Pumo2g02036 854 Pfam Leucine Rich Repeat 378 396 IPR001611 GO:0005515
Pumo2g02036 854 ProSiteProfiles Protein kinase domain profile. 547 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02036 854 SUPERFAMILY Protein kinase-like (PK-like) 532 846 IPR011009 -
Pumo2g02036 854 SMART LRR_sd22_2 282 305 - -
Pumo2g02036 854 SMART LRR_sd22_2 184 217 - -
Pumo2g02036 854 SMART LRR_sd22_2 89 107 - -
Pumo2g02036 854 SMART LRR_sd22_2 376 403 - -
Pumo2g02036 854 SMART LRR_sd22_2 306 332 - -
Pumo2g02036 854 Gene3D Ribonuclease Inhibitor 376 422 IPR032675 -
Pumo2g02036 854 Pfam Leucine Rich repeat 283 298 IPR001611 GO:0005515
Pumo2g02036 854 FunFam Nuclear pore complex protein NUP107 29 178 - -
Pumo2g02036 854 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 281 849 - -
Pumo2g02036 854 Gene3D Ribonuclease Inhibitor 30 178 IPR032675 -
Pumo2g02036 854 SUPERFAMILY L domain-like 42 418 - -
Pumo2g02036 854 ProSiteProfiles Leucine-rich repeat profile. 378 400 IPR001611 GO:0005515
Pumo2g02036 854 Gene3D Transferase(Phosphotransferase) domain 1 623 854 - -
Pumo2g02036 854 FunFam Putative LRR receptor-like serine/threonine-protein kinase 508 622 - -
Pumo2g02036 854 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Pumo2g02036 854 FunFam Calmodulin-binding receptor kinase CaMRLK 255 373 - -
Pumo2g02036 854 Pfam Protein tyrosine and serine/threonine kinase 551 844 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02036 Pumo-Chr2 39845127 39848338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02036 67 850 Receptor kinase-like Gene Family AT4G39400 33.697 2.85e-111 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pumo2g02036 Pkinase 5.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02036 - - gmx:100807051 1583.93