Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02035 ATGTCCACGTCCACGGTGCGAAAATTAGTTTTCAGAAAGCCCCCGGATGGCCTTCTCGAAATCTCTGACAGAGTCTACGTTTTCAACTGCTGTTTCGGCGCGCAACACGAATGGAGCGAAGAATATTACAAACTCCACGTGGACAGGGTTATCGGGCAATTCCGAAGGACAGTGCCTGAGGCTTCTGTTCTGGTGTGCAATTTTCGCGACGAAGAGACCAAAGCCAACACGTTCAACGCGCACGCGCACGACTACGTTTCTCTCGTGGAACACCCTCGCCACCACATGGGTTGCCCCGTGCTCAAGCTGGACGACACGTGGCGCTTTCTGCGGTCGTGCGAGAACTGGCTCTCGCGCGGGCGCCGCGACGACGTCGTTTTGATGCACTGCGAGCGCGGCGCGTGGCCGGTTCTGGCGTTCGCGCTGGCTGCGTTGTTGGTTTTAAAGAAACAGTGCGAGGGAGAGAAACGGGCTTTGGACATGGTTTACGAACAGGCGCCACGTCAGCTTTTGCATTCGTTGATGACCGTGAATCAGATTCCTTCTCAGCTGAGGTATCTGCGCTACGTTGCCACGTGGAACGGGGCGCTGGATTTGGATTCGGTTCCGCTGAACGGGTTTGGTGGCGAACGTGGTTGTGGTGGTCCGGTGTTGAGGGTTTATGGAGAGGATCCTTTTGGTGAGGATGGAAATCCGAAATTGTTGTACTCGACGCCTGAAGGAGGAAAACGTACCCGGGATTACGAACAGGGAGATAGTGATACAATTAAATTCAATATTAATTGCCATATTAAAGGTGATGTCCTGATTGAGAGCATTAACCCGAATAGTGAGCTGGAGAGTGCACAGACGATGTTTCGAGTCATGTTCAATGTGGCCTTTGTTGAATCTAATAATATGTTACAGCTTAACCGGGACAAAATTGATGTTTTATGGTATGCTAAAGATCGCTTCCCAAAGGATTTCAGGGCAGAGATTCTTTTCTCGGAAATGGATGCTTCTACAGCTGTTCGTAAGAATGGCACCTCGTGCTTTGAGGAGAAGGAGGGACTGCCAGTTGAAGCATTTTCCAAAGTTGAGGAAATGTTTAGCTATGCAGACTGGATGAATCCCATGGAAGATCATGCACTAAATGTGCTGGAACAGAAGCATGCTTCACCCGACAATGCCACACATGAAAAGTTGAATACAGGTTCAAATCAGTATGTAGAGAGTGGCAGTCTTTTGCAAAGAAATGGTCCTCAAATGCCTCAAGAGAAGAAGAATGAAGCAAATTGCTTCTTGTCTTCAAATATGGAAAACCAGTTTGTGACCTCAGCTAAGCAATGGCCAGATAACAATGTGAGTAGAAAAGAGGATAAGACCATCAAAACGGATGCTACTTTACCACGGTCAAGTAAGTCTGACATCATCAGTCAAGAGATGCCTAGCCCTTTTGAAAGAACCTCAGAGTCCAGCAACTGTGTTACAGATTGTACAAATCTTTCAAAAGAACTACATCCTTCTGATTTTGCCTTATCTGATTCTGTGGACACCTCTTCTAGTGGTTCCATTTCACCCCAAACACCTCCACCATTGCCTCCCTTGATTAGTAGAGTTGAAGAAGTTCATGATTCTCATCCTCACAAGGATTCACATCCCCATCATCATTCACCTTCGAAATCAAGACAGCTTACTGAAGAAACTAAATCCCAATCTCAAGGTAGAAGTCAGTCATGTAATTTTAGCTCTACAACGGGAACTCCTGTCTCAAGTATTTCTCATCATAAGTCACCAGATGATCACAAGGATTCACATCCCCATCATCACTCACCTTCGAAATCAAGACATCTTACTGAAGAAACTAAATCCCAATCTCAAGATAGAAATCAGTCATGTATTTTTAGCTCTAAAATGGGAACTCCTGTCTCAAGTACTTCTCATCATAAGTCACCAGATGATCACAAGGATTCACATCCCCATCATCATTCACCTTCGAAATCAAGACATCTTACTGAAGAAACTAAATCCCAATCTCAAGATAGAAGTCAGTCATCTACTTTTAGCTCTACAATGGGAACTCCTGTCTCAAGTAATTTTCAGAATAAGTCACCAGATGATTCTGCTTCCCATCCTCCAGATTCTGCAATTACTTCAAATCAACCACCTCCTCTAAAGAAGATTTTACCTGTTGAAACAGAACTAGATTCTTCCCCTTCACAACCTCAAACACCGCCACCTCCTCCTACTCCTCCGCTAAAGGAACATGAACCAATTAGAGCAAGACCTCCTGCATCCCCACCAACTCCTCCCACTCCTCCACTAAAGGAACATGAACCAATTAGAGCTGGAGCTCCTCCATCGCCACCAACTCCTCCTCCAAAGGATGAAAGGCATATCAGATTTCAAGCCCCTCCTTCCCCTCCATCCCCACCTCCTTGTCCTTCTGGAAGATCTGCAAGTTCAACAATGGAACCACCGCCACCGCCACCACCTCCTGTCTCAACACTTTCCTCTGATCACTCTAATTCTTCATCGCATAAGTCTCCACCTGTTCCTGCTGCTCCGCCACCTCCAACTCCCTTTGGTGAAGGAGGTATACAACCAGGCATTGGTTTTCCCAGGTCACTTTCCACGGGTGCTAATAGACATAACGCGTCAAGTGCAAAAGGACATTCATCTATTGGCTCAAAGGGACGAATTCTATCACATTCAAATTCAATGTCTAACACCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTGTCTAGAGCAGTGCATGGAAGCTTGTGGGAGGAGACACAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAAATTGATATGTCCGAGCTTGAAAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCCGTTCCAAAAGGTCAAATGTGCAAAGCTCTGTTGGGCCAAAATCTGATAAAGTGCAACTGATTGATCATACACGAGCGTATAATTGCGAAATTGTTCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGATCAGTGTTAGCACTAGAAGAATTTGCATTAGACACTGATCAAGTTGAGAACCTGATCAAATTTTGTCCTACAAAAGAGGAGATAGATGTACTCAAGGGTTATACTGGAGAAAACGAGAAGCTTGGGAGATGTGAACAGTTCTTCTTGGAATTGATGAAAGTTCCGCGGGTAGAATCTAAGCTCAGAGTCTTTTCATTCAAGATTCAGTTTCACTCTCAGGTTTCTGACCTTAGAAATAGCCTAAATGTAGTTAATGCTGCTTCAGAAGAGATCAGAAATTCTGTCAAATTAAAGAGAATCATGCAAACAATACTTTCTCTGGGAAACGCTTTGAACCAGGGAACTGCCAAGGGCTCTGCTGTTGGATTCAGACTGGATACTCTTCTTAAACTCACTGAGACACGTGGACGGGACAAAAAGATAACTCTAATGCATTACCTTTGTAAGGTTCTGGCAGATAAATTACCAGAAGTTTTAGATTTCTCCAAAAATCTTGCTAACCTTGAGCCAGCAGCAAAGATCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTGAACATGAACGATCCACCTCTGAAAATGATGGTCGTATATCAGAAACTTTCTGCAAGGTATAG 3645 0.4475 MSTSTVRKLVFRKPPDGLLEISDRVYVFNCCFGAQHEWSEEYYKLHVDRVIGQFRRTVPEASVLVCNFRDEETKANTFNAHAHDYVSLVEHPRHHMGCPVLKLDDTWRFLRSCENWLSRGRRDDVVLMHCERGAWPVLAFALAALLVLKKQCEGEKRALDMVYEQAPRQLLHSLMTVNQIPSQLRYLRYVATWNGALDLDSVPLNGFGGERGCGGPVLRVYGEDPFGEDGNPKLLYSTPEGGKRTRDYEQGDSDTIKFNINCHIKGDVLIESINPNSELESAQTMFRVMFNVAFVESNNMLQLNRDKIDVLWYAKDRFPKDFRAEILFSEMDASTAVRKNGTSCFEEKEGLPVEAFSKVEEMFSYADWMNPMEDHALNVLEQKHASPDNATHEKLNTGSNQYVESGSLLQRNGPQMPQEKKNEANCFLSSNMENQFVTSAKQWPDNNVSRKEDKTIKTDATLPRSSKSDIISQEMPSPFERTSESSNCVTDCTNLSKELHPSDFALSDSVDTSSSGSISPQTPPPLPPLISRVEEVHDSHPHKDSHPHHHSPSKSRQLTEETKSQSQGRSQSCNFSSTTGTPVSSISHHKSPDDHKDSHPHHHSPSKSRHLTEETKSQSQDRNQSCIFSSKMGTPVSSTSHHKSPDDHKDSHPHHHSPSKSRHLTEETKSQSQDRSQSSTFSSTMGTPVSSNFQNKSPDDSASHPPDSAITSNQPPPLKKILPVETELDSSPSQPQTPPPPPTPPLKEHEPIRARPPASPPTPPTPPLKEHEPIRAGAPPSPPTPPPKDERHIRFQAPPSPPSPPPCPSGRSASSTMEPPPPPPPPVSTLSSDHSNSSSHKSPPVPAAPPPPTPFGEGGIQPGIGFPRSLSTGANRHNASSAKGHSSIGSKGRILSHSNSMSNTKKLKPLHWLKLSRAVHGSLWEETQKSGEASKAPEIDMSELESLFSAAVPSSGRSKRSNVQSSVGPKSDKVQLIDHTRAYNCEIVLSKVKVPLHDLMRSVLALEEFALDTDQVENLIKFCPTKEEIDVLKGYTGENEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQVSDLRNSLNVVNAASEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAVGFRLDTLLKLTETRGRDKKITLMHYLCKVLADKLPEVLDFSKNLANLEPAAKIQLKFLAEEMQAISKGLEKVEHERSTSENDGRISETFCKV 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 733 747 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 950 971 - -
Pumo2g02035 1214 SMART it6_source 516 1214 IPR015425 -
Pumo2g02035 1214 Gene3D - 197 329 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 671 715 - -
Pumo2g02035 1214 Coils Coil 1177 1197 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 1193 1214 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 797 829 - -
Pumo2g02035 1214 SUPERFAMILY Formin homology 2 domain (FH2 domain) 972 1213 - -
Pumo2g02035 1214 Pfam Formin Homology 2 Domain 900 1214 IPR015425 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 505 902 - -
Pumo2g02035 1214 PANTHER FORMIN-J 6 1213 - -
Pumo2g02035 1214 Gene3D Protein tyrosine phosphatase superfamily 9 196 IPR029021 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 558 587 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 446 460 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 618 640 - -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 641 670 - -
Pumo2g02035 1214 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 190 IPR029021 -
Pumo2g02035 1214 Gene3D Formin, FH2 domain 893 1214 IPR042201 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 755 770 - -
Pumo2g02035 1214 ProSiteProfiles C2 tensin-type domain profile. 194 331 IPR014020 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 588 617 - -
Pumo2g02035 1214 SMART PTEN_C2_2 180 330 IPR014020 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 461 488 - -
Pumo2g02035 1214 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 248 331 IPR035892 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 843 857 - -
Pumo2g02035 1214 Pfam C2 domain of PTEN tumour-suppressor protein 215 330 IPR014020 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 439 488 - -
Pumo2g02035 1214 ProSiteProfiles Formin homology-2 (FH2) domain profile. 897 1214 IPR015425 -
Pumo2g02035 1214 MobiDBLite consensus disorder prediction 871 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02035 Pumo-Chr2 39754691 39774191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02035 4 400 Protein tyrosine phosphatase (PTP) family AT5G58160 46.944 5.92e-115 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02035 - - lja:Lj4g3v1983370.1 962.985