Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02031 ATGATGATGGGTGAGAAAAGCAACAGCGGCGGCGGCGACGCGAATAACTCGACGCTGCTCCACGGGAAGTATGAGCTGGGCCGGCTGTTGGGCCACGGCACGTTCGCGAAGGTGTATCACGCGCGGAACCTGAAGACCGGAAGGAGCGTGGCGATGAAGGTAGTAGGAAAGGAAAAAGTGATGAAGGTGGGAATGATGGAGCAGATCAAGAGAGAGATCTCGGCCATGAACATGGTGAAGCACCCGAACATCGTGCAGCTCCACGAGGTCATGGCGAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCAACAAGATCGCCAGGGGCCGCCTCAGGGAGGAAACCGCCAGGCTCTACTTTCAACAACTCATCTCCGCCGTGGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTGGACGAAGACGGCAACCTCAAGGTCACCGACTTCGGGCTCAGCACCTTCTCCGAGCACCTCCGGCACGACGGCCTGCTGCACACCACGTGCGGCACGCCGGCCTACGTCGCGCCGGAGGTCATCGGAAAGAAGGGCTACGACGGCGCGAAGGCCGATATTTGGTCGTGCGGTGTAATTCTCTATGTGCTTCTTGCCGGTTTTTTACCCTTCCAGGACGACAACTTGGTGGCCTTGTACAAGAAAATTTACCGCGGCGACTTCAAGTGTCCGCCGTGGTTCTCCTCCGAGGCGCGGAGGCTTATCACCAAGCTCCTCGACCCGAACCCGAGTTGCCGGATCTCGATCTCGAAGATCATGGACTCGTCGTGGTTCAAGAAACCAGTGCCGAAGAACTCGGTGGGGAAGAAGAGAGAGGAGTTAGATTTGGAAGAGAAGATTAAACAGCGTGAGGAGGAGGTGCAGTCGTGTACTACGATGAATGCTTTCCACATCATTTCGCTCTCGGAGGGGTTCGATTTGTCGCCGCTGTTTGAGGAGAAGAAGAGGGAGGAGAAGGAGATTCGGTTCGCGACCACGCGCCCCGCGAGCAGCGTGATTTCGCGGTTGGAAGAGGTGGCGAAGGCGATGAAGTTCGACGTGAAGAAGAGCGAGACCAAGGTAAGGTTGCAGGGACAGGAGCGAGGGCGAAAAGGTAAACTCGCTATTGCTGCAGATTTGTACGCCGTAACGCCGTCGTTTTTGGTCGTGGAGGTTAAGAAGGACAACGGTGACACCTTAGAGTATAACAATTTCTGCAGCAAGGAGCTTCGTCCAGCGCTTAAAGACATTGTGTGGAGGACTTCTCCTGCAGAGAATCCTACACCTGCTTGA 1332 0.5668 MMMGEKSNSGGGDANNSTLLHGKYELGRLLGHGTFAKVYHARNLKTGRSVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPSCRISISKIMDSSWFKKPVPKNSVGKKREELDLEEKIKQREEEVQSCTTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRPASSVISRLEEVAKAMKFDVKKSETKVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNNFCSKELRPALKDIVWRTSPAENPTPA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02031 443 SUPERFAMILY Protein kinase-like (PK-like) 21 279 IPR011009 -
Pumo2g02031 443 Gene3D Phosphorylase Kinase; domain 1 21 105 - -
Pumo2g02031 443 Gene3D Transferase(Phosphotransferase) domain 1 106 283 - -
Pumo2g02031 443 CDD CIPK_C 314 428 - -
Pumo2g02031 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Pumo2g02031 443 SMART serkin_6 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02031 443 CDD STKc_SnRK3 23 277 - -
Pumo2g02031 443 ProSitePatterns Protein kinases ATP-binding region signature. 30 57 IPR017441 GO:0005524
Pumo2g02031 443 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02031 443 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Pumo2g02031 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 429 - -
Pumo2g02031 443 Gene3D Kinase associated domain 1, KA1 308 433 - -
Pumo2g02031 443 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Pumo2g02031 443 Pfam NAF domain 311 369 IPR004041 GO:0007165
Pumo2g02031 443 FunFam Non-specific serine/threonine protein kinase 308 432 - -
Pumo2g02031 443 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02031 443 FunFam Non-specific serine/threonine protein kinase 14 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02031 Pumo-Chr2 39633211 39634542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02031 2 437 CBL-interacting serine-threonine protein kinases AT4G30960 73.198 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo2g02031 Pkinase 1.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02031 - K07198 gmx:100806762 808.52