Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02026 ATGGATCAAAAAACTGATAGCTTAATGGGTCTCTGTAACGTGGCTGGAACTGGATTATTTGCTGAAACTTTGGATGGAGATGTGTACAAGTACTACTCTGATGGGGAATGGAAAAAATCTTCTTCAGTGAAAAGTGTTTCTATCATCAACCCCACTACCAGAAAGACTCAATACAAAGTTCAAGCTTGTTCACAAGAAGTTAACAAGGTAATGGATTCAGCAAAATCTGCACAAAAGTCATGGGCAAAGACCCCACTCTGGAAGAGGGCTGAACTTCTTCACAAGGCAGCTGCTATTCTCAAAGAACACAGATCAAATTGCAGAGTGCCTGGTGACAGAAATAGCAAAGCCTGCCAAAGATGCAGTTACCGAGAAGGGGTAAGGATTCTGGGAGAGGGAAAATTCTTGTTATCAGATAGCTTTCCTGGAAATGAAAGGACAAAATATTGCCTCACATCCAAGATTCCATTAGGAGTGATTTTGGCCATTCCACCTTTCAACTATCCTGTCAACCTTGCTGTCTCAAAAATTGCTCCTGCACTGATTGCTGGAAACTCAATTGTGCTCATGCCTCCAACCCAGGGGGCTGTTTCTGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTCCCCAAAGGCCTAATAAGTTGTGTTACTGGCAAAGGCTCAGAAATTGGTGACTTCCTCACTATGCATCCAGGAGTGAACTGTATAAGCTTCACTGGTGGAGATACTGGTATTGCAACTTCAAAGAAGGCAGGCATGATTCCTCCGCAAATGGAGTTGGGAGGAAAGGATGCCTGCATTGTACTTGAGGATGCTGACCTGGATTTGGTGGCTGCAAACATTATAAAAGGAGGATTTTCATACAGTGGTCAGAGGTGCACTGCTGTTAAGGTTGTCCTAGTGATGGAATCAGTTGCTGATGCTTTGGTTGAGAAAGTGAAGGCTAAGGTGGCAAAGCTAAGTGTTGGACCACCAGAAGAGAACTGTGATATCACCCCAGTTGTTTCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTCATGGATGCCAAACAGAAAGGAGAAACATTCTGCCAGGAGTATAGAAGAGAAGGGAATCTCATTTGGCCTTTGCTGCTTGATAATGTTAGGCCTGATATGAGAATTGCATGGGAGGAACCATTTGGACCAGTTTTGCCTGTTATTAGGATAAGCACTATTGAAGAAGGGATCCACCATTGCAATGCTAGCAATTTTGGACTTCAGGGTTGTGTGTTCACAAAGGATATCAACAAAGCAATGATGATCATTGATGCAATGGAGACAGGCACAGTTCAGATAAATTCTGCCCCAGCTCGTGGACCAGACCATTTTCCCTTTCAGGGTATAAAGGACAGTGGAATTGGATCTCAAGGGATTACCAACAGCATAAACATGATGACCAAGGTCAAAACCACAGTGATCAACTTACCAACCCCTTCTTATACCATGGGCTAA 1485 0.435 MDQKTDSLMGLCNVAGTGLFAETLDGDVYKYYSDGEWKKSSSVKSVSIINPTTRKTQYKVQACSQEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHRSNCRVPGDRNSKACQRCSYREGVRILGEGKFLLSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLMPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIATSKKAGMIPPQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKAKVAKLSVGPPEENCDITPVVSESSANFIEGLVMDAKQKGETFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRISTIEEGIHHCNASNFGLQGCVFTKDINKAMMIIDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02026 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 455 IPR016163 GO:0016620
Pumo2g02026 494 PANTHER ALDEHYDE DEHYDROGENASE 9 105 - -
Pumo2g02026 494 SUPERFAMILY ALDH-like 28 485 IPR016161 GO:0016491
Pumo2g02026 494 CDD ALDH_F11_NP-GAPDH 28 485 - -
Pumo2g02026 494 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Pumo2g02026 494 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
Pumo2g02026 494 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 265 455 - -
Pumo2g02026 494 Pfam Aldehyde dehydrogenase family 37 481 IPR015590 GO:0016491
Pumo2g02026 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 35 481 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02026 Pumo-Chr2 39515563 39521256 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02026 14 494 Aldehyde Dehydrogenase Gene Family AT2G24270 83.702 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02026 K00131 - gmx:100789100 848.58