Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02001 ATGGTCTCCAAAATTGCTATTGTGCTTGTTCTTTTTCAAGTCCTTCTCTGCCAAGAGTTTCACACTTTAGAAGCACAAACTTGGGTACAAGCTGGTTATTGGTATTCTGGGAGTGGATTTCCAGTTTCAGACATCAACTCTGCTCTATATACTCACCTCATATGCGCTTTTGCGGAATTGAACTCTTCCACATATGATCTCTTTGTCTCTCCTGCTGATGATCAATCCTTTTCTTCATTCACAAGTACTGTCAAACAAAAGAATCCATCCATCGCTACACTGCTGTCCATTGCAGGTGGAAATGGCAACTACACCGTCTTATCATTAATGGTAAGCAAAGCCTCTTCAAGAAAATCTTTCATTCAGTCTTCAATAAGAATAGCCAGGCTTTATGGTTTTCAAGGCCTGGACCTGTCATGGGTTTCTGCTAACACAAGTTCTGACATGAGCAATATGGGAAAGCTTTTTGAAGAGTGGAGAGAAGCTGCAAAATCTGAGGCAGAAAACTCTAGTACTCAGGAGTTGATCTTAACTGCAGCTGTTCAGTTTAGACCAGGTTTAGATTTCACTTCTTACCCAGTGGAGTCTATTCGGAGTAGCTTGAATTGGATACATGTTATGGCTTATGACTACTACATGCCTCAGTGGGCAAACTTCACTGCTGCACATGCAGCCTTGTATGATCCTTCAAGTTCTGTAAACACAGACAATGGTATCAAGCAATGGATTGGTAGCGGAGTAATGGCTAGCAAGTTGGTTTTGGGGTTGCCCTTCTATGGATATGCCTGGAATCTTAGGAACCCCAAGGACAATGCAATAGGTGCATCAGCAACAGGTCCAGCAATTACAGAAGGTGGAGATATGAGCTATAAGGACATCAAGGCTTATATTCAACGATACCGGGCCAGTGTAAAGTACAATGCTACTTATGTAGTCAATTACTTCTCCATTGGATCAAGTTGGATAGGTTTTGATGATGTTGAGGTTGTCAAAGTGAAGGTGTCATATGCCAGGGAAAAGAAGTTACTTGGCTATGTTGTGTGGCAAGTTCCTTATGATGACAATTGGGCACTTTCTAGTGCTGCAGCTGAACATATTGACCAAAATGGACACCATAGTCAACGATTATTAGTGATCATTCTGATCACAACTGCTCTGTCTGTTCTCCTATTAGGCATCTTAATTTACTACTTAAGGAGGAGATTCTTCAAATCAACAGGAGTGGCTAATGCATCTAGAGATTCTTTGTACAATGTGAATAACGACACTTTAGGACTTTTCCACAGCAATGCTCCTGATTTACGTGTCTTTAGTTTTTCTGATATTGAGCTGGCCACAGATAAATTTTCAATTGAAAATAAGCTTGGTGAGGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACCAAATGGTCAAGAAGTAGCCGTGAAAAAGTTATCAAAAACCTCTACACAAGGATTTGAAGAATTCAAAAATGAGGTGATGCTAACTGCAAGACTCCAACATGTGAATCTCGTTCGGCTGTTGGGTTTCTACATCGATGAAGAAGAACAAATGTTGATCTACGAGTACATGCCAAACAAAAGCCTGGACTTCTATCTATTTGATCCTATCAGACGGTACGTTCTGGATTGGAGAAAACGCATAGACATCATTGAAGGAATTACTCAGGGGCTTCTTTATCTACAAGAATATTCTAGATTGACAATAATCCATAGAGACATAAAAGCTAGCAATATTTTGCTAGACAATGAGATGAAACCAAAAATCTCAGACTTTGGTATGGCAAGAATATTTAGGAAAGACGAACTTGAAGCAAACACTAGCAAAATTGTTGGAACATATGGTTATGTTTCTCCTGAATATGCTATGAAAGGTTTATACTCAACCAAATCCGATGTGTACAGCTTCGGAGTTCTACTTTTACAAATTGTAAGTAGCAGGAGGACAGCATGCTTTTACGGTGAACATGAAAATTTAAACCTCATGGAATATGCTTACGAGCTTTGGAAGGAAGGAAAAGGCTTGGAGTTTACGGATCCTTCACTTGATGACACACATTCAATGTGTAAAATTTTGACGTGCATGCAAGTAGCTTTACTATGTGTGCAGGAAGATGCAAATGATAGGCCGTCTGTGAAGGAAATTTCTTCAATGTTTAAAAGTGACACTATTTTGATAATCCCCCAAAGGCCAGCGTTTTCCATAAATAAAGATGAGAAGAAACCAAATAAATTTATTATGCATGAAGAAATGTTTTCAATTAATGATGCAACAATCTCTCAAGTTGTAGCTCGATAG 2301 0.3946 MVSKIAIVLVLFQVLLCQEFHTLEAQTWVQAGYWYSGSGFPVSDINSALYTHLICAFAELNSSTYDLFVSPADDQSFSSFTSTVKQKNPSIATLLSIAGGNGNYTVLSLMVSKASSRKSFIQSSIRIARLYGFQGLDLSWVSANTSSDMSNMGKLFEEWREAAKSEAENSSTQELILTAAVQFRPGLDFTSYPVESIRSSLNWIHVMAYDYYMPQWANFTAAHAALYDPSSSVNTDNGIKQWIGSGVMASKLVLGLPFYGYAWNLRNPKDNAIGASATGPAITEGGDMSYKDIKAYIQRYRASVKYNATYVVNYFSIGSSWIGFDDVEVVKVKVSYAREKKLLGYVVWQVPYDDNWALSSAAAEHIDQNGHHSQRLLVIILITTALSVLLLGILIYYLRRRFFKSTGVANASRDSLYNVNNDTLGLFHSNAPDLRVFSFSDIELATDKFSIENKLGEGGYGPVYKGILPNGQEVAVKKLSKTSTQGFEEFKNEVMLTARLQHVNLVRLLGFYIDEEEQMLIYEYMPNKSLDFYLFDPIRRYVLDWRKRIDIIEGITQGLLYLQEYSRLTIIHRDIKASNILLDNEMKPKISDFGMARIFRKDELEANTSKIVGTYGYVSPEYAMKGLYSTKSDVYSFGVLLLQIVSSRRTACFYGEHENLNLMEYAYELWKEGKGLEFTDPSLDDTHSMCKILTCMQVALLCVQEDANDRPSVKEISSMFKSDTILIIPQRPAFSINKDEKKPNKFIMHEEMFSINDATISQVVAR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02001 766 SUPERFAMILY (Trans)glycosidases 29 370 IPR017853 -
Pumo2g02001 766 CDD GH18_plant_chitinase_class_V 26 359 - -
Pumo2g02001 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Pumo2g02001 766 Gene3D Glycosidases 42 355 - -
Pumo2g02001 766 Gene3D Transferase(Phosphotransferase) domain 1 525 726 - -
Pumo2g02001 766 Pfam Glycosyl hydrolases family 18 32 353 IPR001223 GO:0005975
Pumo2g02001 766 Pfam Protein kinase domain 450 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02001 766 SUPERFAMILY Protein kinase-like (PK-like) 432 732 IPR011009 -
Pumo2g02001 766 SMART 2g34 28 353 IPR011583 GO:0008061
Pumo2g02001 766 FunFam Uncharacterized protein 525 729 - -
Pumo2g02001 766 ProSiteProfiles Protein kinase domain profile. 449 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02001 766 Gene3D Phosphorylase Kinase; domain 1 411 524 - -
Pumo2g02001 766 Gene3D - 258 324 IPR029070 -
Pumo2g02001 766 CDD STKc_IRAK 455 721 - -
Pumo2g02001 766 FunFam Chitotriosidase-1 258 324 - -
Pumo2g02001 766 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 182 742 - -
Pumo2g02001 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 369 IPR001223 GO:0005975
Pumo2g02001 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 524 - -
Pumo2g02001 766 SUPERFAMILY Chitinase insertion domain 259 324 IPR029070 -
Pumo2g02001 766 SMART serkin_6 449 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02001 Pumo-Chr2 38789098 38794458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02001 370 743 Receptor kinase-like Gene Family AT4G05200 49.337 6.23e-116 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g02001 Glyco_hydro_18 8.2e-68 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02001 - - gmx:100787480 1302.35