Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01993 ATGACAACTGTTGAACCTGCTCTTTGGCTGCGGCGTGTTCGAGAATCGGCGGCGAAAATGCCTTCCCACAAGACGTTCAGGATCAAGAAGAAGCTCGCCAAGAAGATGAGGCAGAACAGGCCCATCCCTTACTGGATCCGCATGAGAACCGACAACACTATCAGGTTCCCGCAACAACCTCTATTATTATAA 192 0.5 MTTVEPALWLRRVRESAAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRFPQQPLLL 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01993 63 Gene3D Ribosomal protein L39e 20 59 IPR023626 -
Pumo2g01993 63 FunFam 60S ribosomal protein-like L39 20 59 - -
Pumo2g01993 63 SUPERFAMILY Ribosomal protein L39e 22 56 IPR023626 -
Pumo2g01993 63 PANTHER RIBOSOMAL PROTEIN L39E 12 55 - -
Pumo2g01993 63 Pfam Ribosomal L39 protein 28 56 IPR000077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01993 Pumo-Chr2 38581311 38585151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01993 20 56 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 83.784 2.14e-18 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01993 K02924 - gmx:100807176 80.4925