Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01986 ATGGAGATTTTCAAATGCTTCTACATCAATCTTCTTGTTACCTTCATGGTATCAGCAGTTCTAGCAATCGACCCTTACTCAGAGGCACTCCTCAGCCTGAAATCTGAGCTTGTAGATGATAATAGCAGCTTGCAGAACTGGTTGGTGCCCTCTGGAGGAAAATTAACGGGGAAATCCTATGCATGTTCTTGGTCAGGTATCAAGTGTAACAATGATTCAACAATTGTAACTTCCATAGACCTTTCCATGAAGAAACTGGCAGGTGAACTGTCAGGGAAGCAATTCAGCATCTTCACAAACCTTACCAGTCTCAACCTGAGCTACAATTTATTCTCCGGGCAGCTTCCAGCTGAGATTTTCAACCTCACCAGCCTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTCCCTTCCCAGGTGGAATTCCCAGACTCCAAAACTTGGTTGTACTTGATGCCTTTAGCAACAGTTTTTCTGGGCCATTGCCTGCTGAATTTTCACAGCTAGCATACCTTAAGGTTCTCAATCTAGCTGGGAGCTACTTCAAAGGGTCAATTCCATCTGAATATGGTTCTTTCAAAAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCTCTCACAGGAAGTATACCTCCAGAACTGGGTAAACTCCAAACAGTGACCCACATGGAGATTGGCTACAACCTATACCAGGGTTTTATTCCACCTGAATTAGGTAACATGAGTCAGCTTCAGTATCTTGACATAGCAGGAGCAAATCTCTCTGGCCCTATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTTTTCCTCTTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGCTCAGCAACATTGAACCTCTCACAGATTTAGATCTCTCTGATAACTTCCTCACAGGGTCCATTCCTGAAAGCTTCTCAGAGCTTGAGAACCTAAGACTTCTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCTGAAGGCATTGCACAACTCCCATCCTTAGAAACTCTTCTCATTTGGAACAACCGCTTCTCTGGCTCACTTCCACAGAGCTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACGATTTAGTTGGCAGCATACCACCAGACATTTGTGTGGTCTTTCATCAATCTCCAATTGTTCTTCCCTCGTTCGCCTTCGGCCTAGAAGATAATTCACTCTCGGGAGAAATCACTTTGAAATTCAGCCATCTTCCTGATATCTTATATGTTGATCTGTCCAGGAACAACTTCGTTGGTGGGATTCCCTCAGATATTTCTCAAGCCACTCAACTGGAGTATTTCAATGTCTCTTATAATCTGCTATTAGGAGGCATCATCCCTGCACAAACGTGGTCTTTGCCCCAACTTCAGAATTTCTCAGCATCTTCTTGTGGTATTTCTAGTGATCTTCCCCCATTTGAGTCCTGCAAATCAATTTCAGTTATTGATCTAGATAGCAACAACTTAACTGGAACCATCCCAAACAGTGTTTCCAAATGTGAAGCTCTTGGGCAAATCAACCTATCCAACAATAATTTGACAGGTCATATACCTGATGGGCTTGCCACTATTCCTGTTCTTGGTTTAGTGGACCTATCAAACAATAACTTCAATGGCCCCATACCTGCTAGGTTTGGTAGTTCTTCAAGTTTACAACTTCTCAATGTGTCGTTCAACAACATCTCTGGTTCAATACCCACAGGAAAGTCATTCAAATTAATGGGAAGCAGTGCATTTGTTGGGAATTCAGAGCTATGTGGAGCACCCCTGCGACCATGTCCTGATTCAGTTGGAATATTGGGCAGCAAAGGCACGTGGAAGGTTACACGTATTGTGCTACTCTCTGTAGGGTTGCTAATAGTCCTTCTGGGACTTGCTTTTGGAATATTTTATTTGAGAAGGGGAATCAAATGTCAATGGAAGATGGTCTCATTCGCGGGTCTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCCTCAGTGCCACAAAACCTACAGAAGTTCCATCACCATCACCAGCAGTTACAAAGGCTGTTCTACCTACAGGAATAACAGTTTTGGTCAAGAAGATTGAGTGGGAAGCAAAGAGCATCAAGGTTGTGTCAGAATTCATAATGAGACTGGGAAATGCAAGGCACAAGAATTTGATCAGATTGTTGGGGTTCTGCCACAACCAGCATCTAGTGTATCTTTTGTATGATCACTTGCCCAATGGGAATTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCCCATGGTGACTTGAAGCCAAGCAACATTGTATTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAAGTGTTGAAATGGAGCAAAGGCTCATCACCCACCACAACAAAGTGGGAAACAGAATACGATGAAGTCACAAAAGAGGAACTGTGCATGGATATCTACAAATTTGGGGAGATGATTCTGGAAATTTTAACCGGCGGAAGGTTGACAAATGCAGGAGCCAGCATACACAGCAAACCATGGGAGGTTCTCTTAAGAGAAATTTACAATGAGAACGAAGGCAACTTCTGCAGGTTCATTGCAGGAGATTAA 2694 0.4324 MEIFKCFYINLLVTFMVSAVLAIDPYSEALLSLKSELVDDNSSLQNWLVPSGGKLTGKSYACSWSGIKCNNDSTIVTSIDLSMKKLAGELSGKQFSIFTNLTSLNLSYNLFSGQLPAEIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLVVLDAFSNSFSGPLPAEFSQLAYLKVLNLAGSYFKGSIPSEYGSFKSLEFLHLAGNSLTGSIPPELGKLQTVTHMEIGYNLYQGFIPPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSELSNIEPLTDLDLSDNFLTGSIPESFSELENLRLLSLMYNDMSGTVPEGIAQLPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDASTNDLVGSIPPDICVVFHQSPIVLPSFAFGLEDNSLSGEITLKFSHLPDILYVDLSRNNFVGGIPSDISQATQLEYFNVSYNLLLGGIIPAQTWSLPQLQNFSASSCGISSDLPPFESCKSISVIDLDSNNLTGTIPNSVSKCEALGQINLSNNNLTGHIPDGLATIPVLGLVDLSNNNFNGPIPARFGSSSSLQLLNVSFNNISGSIPTGKSFKLMGSSAFVGNSELCGAPLRPCPDSVGILGSKGTWKVTRIVLLSVGLLIVLLGLAFGIFYLRRGIKCQWKMVSFAGLPQFTANDVLTSLSATKPTEVPSPSPAVTKAVLPTGITVLVKKIEWEAKSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHLVYLLYDHLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKPSNIVFDENMEPHLAEFGFKQVLKWSKGSSPTTTKWETEYDEVTKEELCMDIYKFGEMILEILTGGRLTNAGASIHSKPWEVLLREIYNENEGNFCRFIAGD 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01986 897 Gene3D Ribonuclease Inhibitor 395 610 IPR032675 -
Pumo2g01986 897 SMART LRR_typ_2 194 218 IPR003591 -
Pumo2g01986 897 SMART LRR_typ_2 266 290 IPR003591 -
Pumo2g01986 897 SMART LRR_typ_2 98 122 IPR003591 -
Pumo2g01986 897 SMART LRR_typ_2 338 362 IPR003591 -
Pumo2g01986 897 SUPERFAMILY Protein kinase-like (PK-like) 688 865 IPR011009 -
Pumo2g01986 897 FunFam Leucine-rich repeat receptor-like protein kinase 26 187 - -
Pumo2g01986 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pumo2g01986 897 FunFam Leucine-rich repeat receptor-like protein kinase TDR 188 288 - -
Pumo2g01986 897 FunFam Leucine-rich repeat receptor-like protein kinase TDR 749 894 - -
Pumo2g01986 897 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Pumo2g01986 897 Pfam Protein kinase domain 688 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01986 897 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Pumo2g01986 897 ProSiteProfiles Protein kinase domain profile. 653 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01986 897 SUPERFAMILY RNI-like 78 386 - -
Pumo2g01986 897 FunFam Leucine-rich repeat receptor-like protein kinase TDR 664 748 - -
Pumo2g01986 897 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 289 383 - -
Pumo2g01986 897 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 396 610 - -
Pumo2g01986 897 Gene3D Transferase(Phosphotransferase) domain 1 687 887 - -
Pumo2g01986 897 Gene3D Ribonuclease Inhibitor 284 390 IPR032675 -
Pumo2g01986 897 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Pumo2g01986 897 Gene3D Ribonuclease Inhibitor 181 283 IPR032675 -
Pumo2g01986 897 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 184 864 - -
Pumo2g01986 897 SUPERFAMILY L domain-like 401 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01986 Pumo-Chr2 38264431 38267571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01986 7 897 Receptor kinase-like Gene Family AT5G51350 52.505 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo2g01986 Pkinase 4.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01986 - - gmx:100782323 1540.01