Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01933 ATGCCCTATTATCTTTCTCTCTCTATGCCTTTCTCTCTTTCTCTCTCTTCACTCTCCACCACCATGCCCCCAGCCGCTGGAGCCATAGCCCTACACTCTTCCCTCTGCTCCATCTCTTCTGAGAAACCCTCTTCTCCTCTAAGATCACCCCCCCTCCATGTGGCACCAAAGCCCAAAAGCCTCCTCCAAAACCACCCTCTCTACACCGCAACACACACCAAACTCTCCCTTGAATTTAAGGAGAAAATCCTCTGCCTTGAGGTAATGGGTGTTGATGCAGGCAAGGCACTGTCCCAAAACCCTGATCTCCGCACAGCCACCATGGAATCTATCCACTCCATCATCTCCTTCCTCCTCTCCAAGGGCCTCCAAGAAAAGGACTTGCCAAGAATATTTGGCATGTGCCCCAAGATTCTCACCTCTGACATCAAAGCTGATCTCACCCCAGTTTTTGATTTCATCCTGCATGAGCTCAAAGTCCCTGAACACAGCTTCAGGAGGGTTGTCAACAAGTGCCCTAGATTGCTCACATCTAGTGTGAAGGACCAGCTTAGGCCTTGTTTGGTTTACCTAAGGAGACTTGGGTTCAAGGATTTGGGGGCCTTGGCCTATCAAGATTCTGTTTTGTTGGTGTCTAATGTGGAAAACACCCTCATCCCTAAACTGAAGTTTTTGGAGACTTTGGGGCTCTCCAAGGATGAGGTTAGGAGTATGGTGTTGAGGTGTCCAGCACTGCTCACTTTCAGCATAGAAAATAACTTTCAGCCAAAGTATGAGTATTTTGCTGGGGAAATGGGGAGAAAGTTGGAGGAGCTGAAAGAGTTTCCTCAGTACTTTGCCTTTAGTTTGGAGAACAGGATAAAGCCTAGACACATGGAGGTTGTGCAAAGTGGGATCACTTTAGCTTTGTCAGTGATGCTTAAAAGCACTGATGAGGAATTTAGGGAGCTGGTAAAGCAGGGAGGTGGTTGA 972 0.4794 MPYYLSLSMPFSLSLSSLSTTMPPAAGAIALHSSLCSISSEKPSSPLRSPPLHVAPKPKSLLQNHPLYTATHTKLSLEFKEKILCLEVMGVDAGKALSQNPDLRTATMESIHSIISFLLSKGLQEKDLPRIFGMCPKILTSDIKADLTPVFDFILHELKVPEHSFRRVVNKCPRLLTSSVKDQLRPCLVYLRRLGFKDLGALAYQDSVLLVSNVENTLIPKLKFLETLGLSKDEVRSMVLRCPALLTFSIENNFQPKYEYFAGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGITLALSVMLKSTDEEFRELVKQGGG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01933 323 Pfam mTERF 94 196 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 Pfam mTERF 209 314 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 236 268 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 94 124 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 129 161 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 166 197 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 SMART mt_12 200 231 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 FunFam Transcription termination factor MTEF1, chloroplastic 154 321 - -
Pumo2g01933 323 PANTHER CGI-12 PROTEIN-RELATED 35 318 IPR003690 GO:0003690|GO:0006355
Pumo2g01933 323 Gene3D Transcription termination factor 3, mitochondrial 141 320 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01933 Pumo-Chr2 37116766 37118235 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g01933 mTERF 1.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01933 K15032 - gmx:100788221 579.711