Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01868 ATGGATCCCTTTGTGATTGGTTTTCAGCTTAACCCCATTCCAATGAAAATGCCTGGCATAATAATTGCTTCCACGAATGATTCCAAGGTTTTAATGCAATACTACAATTGTTCATTGGAAATAGACGCTGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTTGCCAGTATCTGCGGTGGACTAAAAGCGAACTACAATAGTGTTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCTGATCCAGAGGACAGTCTTCCTCACGAAGCCGACATTTTGAAACCTAACTTGTTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTGTTGGCACCGATTCGGTTGAATTCCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCACCACATGTTGCTGGTCTTGCTGCACTAATTAGGCAAAAGTACCCCAATTTCAGTCCTGCAGCCATTGGATCTGCTCTTTCCACTACAGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAGCGATCATATGCCTCTCCAGATCTAAACCAGTCTCCGGCAACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCACTGAATCCGGGTTTGGTTTTTGATTCTGGCTATGATGATTACATGTCATTTCTCTGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACCGGTCAAAATTGCGGGCTCTATAATTCCACTGTCTATGGTCCTGATCTGAACTTGCCCTCCATCACTATATCAAAGCTAAACCAATCCAGAGTAGTGCAGAGGACAGTCCAAAACATTGCCCAAAATGAATCTTACAGTGTTGGTTGGACTGCTCCTTCTGGGGTTTCAGTGAAAGTGTCTCCAACTCACTTCTGTATTGCCAATGGTGAGAGGCAGGTCTTGTCTGTGCTCTTGAATGCAACCCTTAACAGCTCTGTGACCACCTTTGGGAGAATTGGGCTGTTTGGGAATCAAGGTCATGTTGTCAACATTCCTCTTTCAGTCATGGTTAAAATTTCATCTAACACCACTACTAGCTAA 1068 0.4401 MDPFVIGFQLNPIPMKMPGIIIASTNDSKVLMQYYNCSLEIDAVSKKIVKFGAVASICGGLKANYNSVAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGNFIWAAWSSVGTDSVEFLGENFALMSGTSMAAPHVAGLAALIRQKYPNFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPDLNQSPATPFDMGSGFVNASGALNPGLVFDSGYDDYMSFLCGINGSAPVVLNYTGQNCGLYNSTVYGPDLNLPSITISKLNQSRVVQRTVQNIAQNESYSVGWTAPSGVSVKVSPTHFCIANGERQVLSVLLNATLNSSVTTFGRIGLFGNQGHVVNIPLSVMVKISSNTTTS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01868 355 ProSitePatterns Serine proteases, subtilase family, serine active site. 128 138 IPR023828 -
Pumo2g01868 355 Gene3D Peptidase S8/S53 domain 66 218 IPR036852 GO:0004252|GO:0006508
Pumo2g01868 355 SUPERFAMILY Subtilisin-like 21 255 IPR036852 GO:0004252|GO:0006508
Pumo2g01868 355 Gene3D - 222 347 - -
Pumo2g01868 355 Gene3D - 55 65 - -
Pumo2g01868 355 ProSiteProfiles Serine proteases, subtilase domain profile. 1 205 - -
Pumo2g01868 355 Pfam Subtilase family 44 170 IPR000209 GO:0006508|GO:0008236
Pumo2g01868 355 Pfam Fibronectin type-III domain 251 344 IPR041469 -
Pumo2g01868 355 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 343 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01868 Pumo-Chr2 35688746 35691534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01868 1 351 Subtilisin-like Serine Gene Family AT4G20430 65.527 1.26e-166 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01868 - - gmx:100796456 682.174