Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g01859 | ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGATTATTCATCATAATCATTCTCGCGGTGCTATCAATATGTCTCACTTTAAGAAAAAAGTTCAGAAGAGTCAATGGCAAGCTTCAATCTAGCCATGTGATATCTGTTTCAGACGAGATCAAAGAAATCAGAGTTGATCAAGTGTCAGCAAATAATCATCCACAAAATGGTGCTTTTACGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACGAACCAAAGAATGGGGAGAATAGTAGTCAATCAGGATCGTTTAATCGTTTAGACAAAGATGCTAATGGCTCTCAATCAGGAGAAGACAGTGGTGTTAAGAGCGTTTCTGCATACAGATCTTCTTCGCATCCTATAACCGCGCCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTCGAACTTGCAACAAACAGGTTTGCAAAAGACAATGTTATTGGTGAAGGTGGATATGGAATTGTTTATCGCGGTCAATTGATCAATGGGAGTCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAGTGGCTTCACGGAGCCATGCGGCAGCATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACGGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCGGACTTTGGGTTGGCTAAGTTGCTTGGTGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAACGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCGATTACAGGAAGAGACCCAGTTGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGATTGGCTCAAGATGATGGTGGGGTGTCGGCGCTCAGAAGAGGTGTTGGACCCTAACATCGAGACTAGGCCATCGACAAGTACCCTTAAGCGCGCCCTCTTGACTGCTCTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCACGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAGGTAGAGACTCAGAGGGAGAATTCTGATACTGATAAGAGTGACAATCCAGATTATAAGCCCAATGGCAGAAGGAACCAATGCGTGTAG | 1515 | 0.4356 | MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILAVLSICLTLRKKFRRVNGKLQSSHVISVSDEIKEIRVDQVSANNHPQNGAFTSLNDKFGDRESEKVLNEPKNGENSSQSGSFNRLDKDANGSQSGEDSGVKSVSAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKDNVIGEGGYGIVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVLDPNIETRPSTSTLKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGNMEVETQRENSDTDKSDNPDYKPNGRRNQCV | 504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g01859 | 504 | CDD | STKc_IRAK | 188 | 454 | - | - | |
Pumo2g01859 | 504 | MobiDBLite | consensus disorder prediction | 457 | 495 | - | - | |
Pumo2g01859 | 504 | FunFam | Putative receptor-like protein kinase | 164 | 257 | - | - | |
Pumo2g01859 | 504 | Pfam | Protein kinase domain | 183 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g01859 | 504 | SMART | serkin_6 | 182 | 453 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g01859 | 504 | FunFam | Putative receptor-like serine/threonine-protein kinase | 258 | 469 | - | - | |
Pumo2g01859 | 504 | SUPERFAMILY | Protein kinase-like (PK-like) | 166 | 461 | IPR011009 | - | |
Pumo2g01859 | 504 | MobiDBLite | consensus disorder prediction | 457 | 504 | - | - | |
Pumo2g01859 | 504 | MobiDBLite | consensus disorder prediction | 106 | 152 | - | - | |
Pumo2g01859 | 504 | Gene3D | Phosphorylase Kinase; domain 1 | 163 | 257 | - | - | |
Pumo2g01859 | 504 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 304 | 316 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo2g01859 | 504 | ProSiteProfiles | Protein kinase domain profile. | 182 | 459 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g01859 | 504 | ProSitePatterns | Protein kinases ATP-binding region signature. | 188 | 211 | IPR017441 | GO:0005524 | |
Pumo2g01859 | 504 | MobiDBLite | consensus disorder prediction | 100 | 154 | - | - | |
Pumo2g01859 | 504 | Gene3D | Transferase(Phosphotransferase) domain 1 | 258 | 469 | - | - | |
Pumo2g01859 | 504 | PANTHER | OS01G0323000 PROTEIN | 4 | 485 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g01859 | Pumo-Chr2 | 35251979 | 35257320 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g01859 | 27 | 456 | Trihelix Transcription Factor Family | AT1G70460 | 41.149 | 1.90e-94 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-V | Pumo2g01859 | Pkinase | 9.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g01859 | - | - | gmx:732653 | 954.896 |