Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01856 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGATTATTCATCATAATCATTCTCGCGGTGCTATCAATATGTCTCACTTTAAGAAAAAAGTTCAGAAGAGTCAATGGCAAGCTTCAATCTAGCCATGTGATATCTGTTTCAGACGAGATCAAAGAAATCAGAGTTGATCAAGTGTCAGCAAATAATCATCCACAAAATGGTGCTTTTACGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACGAACCAAAGAATGGGGAGAATAGTAGTCAATCAGGATCGTTTAATCGTTTAGACAAAGATGCTAATGGCTCTCAATCAGGAGAAGACAGTGGTGTTAAGAGCGTTTCTGCATACAGATCTTCTTCGCATCCTATAACCGCGCCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTCGAACTTGCAACAAGCAGGTTTGCAAAAGACAATGTTATTGGTGAAGGTGGATATGGAATTGTTTATCGCGGTCAATTGATCAATGGGAGTCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAGTGGCTTCACGGAGCCATGCGGCAGCATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACGGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCGGACTTTGGGTTGGCTAAGTTGCTTGGTGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAACGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCGATTACAGGAAGAGACCCAGTTGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGATTGGCTCAAGATGATGGTGGGGTGTCGGCGCTCAGAAGAGGTGTTGGACCCTAACATCGAGACTAGGCCATCGACAAGTACCCTTAAGCGCGCCCTCTTGACTGCTCTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCACGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAGGTAGAGACTCAGAGGGAGAATTCTGATACTGATAAGAGTGACAATCCAGATTATAAGCCCAATGGCAGAAGGAACCAACGCGTGTAG 1515 0.437 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILAVLSICLTLRKKFRRVNGKLQSSHVISVSDEIKEIRVDQVSANNHPQNGAFTSLNDKFGDRESEKVLNEPKNGENSSQSGSFNRLDKDANGSQSGEDSGVKSVSAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATSRFAKDNVIGEGGYGIVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVLDPNIETRPSTSTLKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGNMEVETQRENSDTDKSDNPDYKPNGRRNQRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01856 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Pumo2g01856 504 CDD STKc_IRAK 188 454 - -
Pumo2g01856 504 FunFam Putative receptor-like protein kinase 164 257 - -
Pumo2g01856 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01856 504 SUPERFAMILY Protein kinase-like (PK-like) 166 461 IPR011009 -
Pumo2g01856 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01856 504 FunFam Putative receptor-like serine/threonine-protein kinase 258 469 - -
Pumo2g01856 504 PANTHER OS01G0323000 PROTEIN 4 485 - -
Pumo2g01856 504 MobiDBLite consensus disorder prediction 106 152 - -
Pumo2g01856 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Pumo2g01856 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01856 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pumo2g01856 504 MobiDBLite consensus disorder prediction 100 154 - -
Pumo2g01856 504 Gene3D Transferase(Phosphotransferase) domain 1 258 469 - -
Pumo2g01856 504 MobiDBLite consensus disorder prediction 443 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01856 Pumo-Chr2 35156607 35161951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01856 27 456 Trihelix Transcription Factor Family AT1G70460 41.149 2.34e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo2g01856 Pkinase 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01856 - - gmx:732653 955.281