LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g01851	ATGGTGATTTTAAACCTTGGGAGAAATGAGGGGCAGGGAATGCGACTTGGGAAATACGAGTTGGGAAAGACTCTTGGGGAGGGCAATTTTGGAAAAGTCAAGTTGGCAAGGGACACTCATTCTGGGCAACTCTTTGCTGTTAAGATCCTTGACAAGAGCAAGATCATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATCCACCTTGAAGCTCCTGAAACATCCGAACGTGGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGAAAAAATTGCATCCAAAGGTAAACTTAAAGAAGCTGAAGGTAGGAAGATATTCCAACAGTTGATTGATTGTGTGAGCTTCTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTGGAGAATGTACTTGTGGATGCCAGAGGGAACATAAAGATAACCGATTTTAACCTTAGTGCTTTGCCCCAGCACTTTAGGGCAGATGGGTTGCTACATACAACATGTGGAAGTCCCAACTATGTTGCCCCTGAGATTCTTGCCAATAAAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTTAAAGGAGAAGTTCAGATACCAAGATGGCTATCACCTGGTTCTCAAAACATTATAAAGAGAATGCTTGATCCCAATCCTAAAACCCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGTTATACTCCTGCAAATCCAGAAGATGAGGAAGAGAATGTGTATATTGATGATGAAGCCTTTTCCATCCATGATGTGTCACTTGAAGCAGATCAGGGGAGTCCAAGATCAGCAACACTTATCAATGCATTTCAGTTGATATCGATGTCTTCAAGTCTAGACCTCTCTGGCCTTTTTGAGCAAGAGGATGTTTCTGAGAGGAAGATAAGATTTACATCCATCCATTCACCAAAAGATTTGGTTGAGAGGATAGAAGACATTGTAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGGATGTTGAAAGTGATACAAGAGATCAAAGCACAGAAAAGTCTAGGTAGCCTCTCAGTGGCAGCAGAGGTGTTTGAAATAAGTCCATCCTTATATGTAGTAGAGTTAAGTAAGTCTTGTGGAGATGCTTCTGTATATAGACAGTTATGCAAGAAGTTGTCAAATGATTTGGGTGTCCACACAAAGCAACAACTAGGGAGCTCAGAAGTGATGGCTTGA	1344	0.4055	MVILNLGRNEGQGMRLGKYELGKTLGEGNFGKVKLARDTHSGQLFAVKILDKSKIIDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFEKIASKGKLKEAEGRKIFQQLIDCVSFCHNKGVFHRDLKLENVLVDARGNIKITDFNLSALPQHFRADGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGEVQIPRWLSPGSQNIIKRMLDPNPKTRITMAMIKEDEWFKEGYTPANPEDEEENVYIDDEAFSIHDVSLEADQGSPRSATLINAFQLISMSSSLDLSGLFEQEDVSERKIRFTSIHSPKDLVERIEDIVTEMGFRVQKKNGMLKVIQEIKAQKSLGSLSVAAEVFEISPSLYVVELSKSCGDASVYRQLCKKLSNDLGVHTKQQLGSSEVMA	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g01851	447	Gene3D	Phosphorylase Kinase; domain 1	9	98	-	-
	Pumo2g01851	447	Gene3D	Transferase(Phosphotransferase) domain 1	99	280	-	-
	Pumo2g01851	447	FunFam	Non-specific serine/threonine protein kinase	10	98	-	-
	Pumo2g01851	447	ProSitePatterns	Protein kinases ATP-binding region signature.	25	48	IPR017441	GO:0005524
	Pumo2g01851	447	ProSiteProfiles	NAF domain profile.	312	336	IPR018451	GO:0007165
	Pumo2g01851	447	Pfam	NAF domain	316	373	IPR004041	GO:0007165
	Pumo2g01851	447	CDD	CIPK_C	318	429	-	-
	Pumo2g01851	447	Pfam	Protein kinase domain	19	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo2g01851	447	FunFam	Non-specific serine/threonine protein kinase	12	314	-	-
	Pumo2g01851	447	SUPERFAMILY	Protein kinase-like (PK-like)	16	319	IPR011009	-
	Pumo2g01851	447	Gene3D	Kinase associated domain 1, KA1	312	434	-	-
	Pumo2g01851	447	Coils	Coil	446	447	-	-
	Pumo2g01851	447	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	138	150	IPR008271	GO:0004672\|GO:0006468
	Pumo2g01851	447	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	12	419	-	-
	Pumo2g01851	447	Pfam	Haspin like kinase domain	88	166	-	-
	Pumo2g01851	447	ProSiteProfiles	Protein kinase domain profile.	19	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo2g01851	447	FunFam	Non-specific serine/threonine protein kinase	314	436	-	-
	Pumo2g01851	447	SMART	serkin_6	19	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g01851	Pumo-Chr2	34871144	34878642	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo2g01851	82	439	CBL-interacting serine-threonine protein kinases	AT3G17510	69.359	5.61e-172	485

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pumo2g01851		Pkinase	2.2e-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g01851	K07198		-	gmx:100815660	843.188