Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01846 ATGGAAGAAAAAGTTGTGTTAAAAAAATTGCTGGAAGATGAGGAAAAGCCGTATGATAATAATACAAACGCACGGAATGGAACCGATGAACCATCCTCTCATAATTCTATGGGATCTACTCTTCTCAGCTTGAGCCTGAATAACTCAGGACAACCCCTTAACCAAATGGGCATGCTGCGAATCAAGCTTGAGGAAGCGAAGAAAGAGAATGAAATTTTAAAGGCTATGCTAAATCAGGTTAATGAACACTGCACTGCTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTATCTTCATCATCACCTCGGAATAATAATAATAATCATCATCATGACTCGCAGGGAAATAAACAAGATGCGAAGAAACCAATGCTACACACAAGGCAGTTTTTGAATATTGGCGAGTCTTCATCAATTTTAGAGGGCAACACAAAAGCATGTTTATCAATGGAAAACATTGAAAAGAAAATATTAGGCAGAAACCTTGCAAGTGATAATAATAAGTACAATGTTGAAGGTGAAATCAACAGCCAAATAACATCGCATGAAGCAAAAAGCACAGAAGATCAAGCATTATCTGAGGTTACTTGCAGGAGAGCTAGAGTGTCCATAAGAGCACGATCAGATTTTTCTTTGATGGGCGATGGGTGTCAGTGGAGAAAGTACGGACAAAAGACAGCGAAGGGCAACCCTTGTCCCCGAGCCTACTACCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTTCTCATCACAACATATGAAGGGAACCACAACCATCCACTCCCACCAGCAGCTAGACCTTTGGCAAGCTCAACATCAGCTGCACTGAACATGTTCCTTTCTGGCTCAATCACAAGTTCACATGCCACCACCACCACCACTCTATCAAACTCATCACCCCTCTTCTCTTCCTCCTCACTATCCACCATTTCCCCAACTGCTGTGGCCACTTTCTCCCAAAATGCAACATGCCCCACAGTAACACTGGACCTAACCCAGCCCAACAACAACAACAACAACAACTATCTCCAATTCCAAAGGGCCACCACCACTTCCTCACAAGACCACAGACAACCACTGTTCCCTCTGCCACTGCATGGCCACCCTCAAAATTATTCTGAGGGGTTGCACTTGTTGTCTAAGGTTCCAATTCCAACCATGTTAACCCCAGAGAATAAAAACCTTGCCTTGGTGGATGTTGTCAGTGAGGCTATAACCAAAGATCCTTCTCTCAAGGCAGCACTGTTTTCAGCCATTTCCTCACTCACTGGAGATCCTGATCAGAAGAACATCATCAATAACCACAGCCAGCATAGTAGTAAGAGTAGCAGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATACCACCTCATCAGCCTTACACTACTCAGTTGATATAG 1446 0.4364 MEEKVVLKKLLEDEEKPYDNNTNARNGTDEPSSHNSMGSTLLSLSLNNSGQPLNQMGMLRIKLEEAKKENEILKAMLNQVNEHCTALQNRILFEMQQHQLSSSSPRNNNNNHHHDSQGNKQDAKKPMLHTRQFLNIGESSSILEGNTKACLSMENIEKKILGRNLASDNNKYNVEGEINSQITSHEAKSTEDQALSEVTCRRARVSIRARSDFSLMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPLASSTSAALNMFLSGSITSSHATTTTTLSNSSPLFSSSSLSTISPTAVATFSQNATCPTVTLDLTQPNNNNNNNYLQFQRATTTSSQDHRQPLFPLPLHGHPQNYSEGLHLLSKVPIPTMLTPENKNLALVDVVSEAITKDPSLKAALFSAISSLTGDPDQKNIINNHSQHSSKSSSGYDPCSKMPAIPPHQPYTTQLI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01846 481 MobiDBLite consensus disorder prediction 1 20 - -
Pumo2g01846 481 MobiDBLite consensus disorder prediction 1 49 - -
Pumo2g01846 481 SUPERFAMILY WRKY DNA-binding domain 209 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g01846 481 Coils Coil 56 90 - -
Pumo2g01846 481 MobiDBLite consensus disorder prediction 440 462 - -
Pumo2g01846 481 MobiDBLite consensus disorder prediction 98 125 - -
Pumo2g01846 481 ProSiteProfiles WRKY domain profile. 211 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g01846 481 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 53 452 IPR044810 GO:0003700
Pumo2g01846 481 MobiDBLite consensus disorder prediction 440 481 - -
Pumo2g01846 481 MobiDBLite consensus disorder prediction 98 112 - -
Pumo2g01846 481 MobiDBLite consensus disorder prediction 21 49 - -
Pumo2g01846 481 Gene3D WRKY domain 200 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g01846 481 FunFam probable WRKY transcription factor 31 201 278 - -
Pumo2g01846 481 Pfam WRKY DNA -binding domain 218 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g01846 481 SMART WRKY_cls 216 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01846 Pumo-Chr2 34735443 34742082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01846 59 348 WRKY Transcription Factor Family AT4G04450 40.994 2.33e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo2g01846 WRKY 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01846 - - gmx:100781603 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01846 2 34735443 34742082 Pumo4g00553 4 7317773 7318012 PCT