Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01830 ATGGCTCTTACTTCAAAGAAAGAGTTATCTCGAATAGTAACAACACTAACTACACCCACTGTCACACTCATCTTCTTCTTCGTGCTCTTTCCGAGCCTGTACAGTGCCGCACTTGGCAACACCAACACCGTGGGATCGGAGTTGCTGAAGGTTGCTCCTTCTGAATTCGCGGGGACAGTGAAGACTGTCGTTGATGTGTTGCAAGATGTAACCTCTATTCTCTCTGAGTTCGGTTCCGGCTTCGGCGATTCGCGTCTTTCTAATGCCGTTTCTGACTGTCTTGATTTGCTTGACATGTCCTCTGATGAACTCGATTGGTCTGTCTCTGCCACCCAGAGTCCCCAAGGGAAGCACAACAGCACAGGAAACACAAGTTCCGATTTAAGGACATGGCTAAGCGCAGCACTTGCAAATCAAGACACATGCATGGACGGATTCAACGGCACCAACGGCATAGTGAAGGGTTTAGTATCCACCGGTCTAAGCCAAATAATGTCATTGCTGCAAGAACTTCTCACACAGGTGAACCCTTCTTCAGACCACTTCTCATTCTCCACCCCACAGGGCCAATTCCCTTCATGGGTTAAACCAGGGGAAAGAAAGCTACTCCAAGCAAATGGGGTGCGTTTTGACGCTGTGGTGGCCACCGATGGAACCGGTAACTTCACCAAGGTGATGGATGCGGTGTTGGCCGCACCTAATTATAGCATGAAAAGGTATGTGATATACGTGAAGAGGGGTGTTTACCATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGGTTGGAGATGGCATGGATGCCACTGTGATTTCTGGGAACCGGAGCTTCATTGATGGTTGGACCACGTTCCGGTCAGCTACCTTTGCTGTGAGTGGCAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACGGCAGGACCAGAGAAGCACCAAGCTGTGGCACTAAGATCAGACTCTGACCTCTCTGTATTCTTCCGATGTGGGATCTTCGGTTACCAAGACAGCCTCTACACTCACACCATGCGACAATTCTACAGAGAATGCAAAATCAGTGGCACCGTGGACTTCATCTTCGGTGATGCCACTGCCATTTTCCAAAACTGCCAAATCTCAGCCAAAAAAGGGTTACCAAATCAAAAGAACACCATCACAGCACATGGGAGAAAAAACCCAGATGAACCAACCGGTTTCTCCATCCAATTTTGCAACATCTCTGCTGATTATGACCTTGTTAATTCACTTAACTCCACCCACACTTACCTTGGTAGGCCTTGGAAGCCATATTCTAGGACAATTTTCATGCAATCTTACATTGGTAATGTGTTGAGGCCAGAGGGGTGGTTGGAGTGGAATGGGGACTTTGCCTTGGACACATTGTACTATGCTGAGTACATGAATTATGGGCCTGGTGCTGGAGTAGCTAACAGGGTGAAATGGCCAGGGTACCATGTGATGAATGATTCTAGCCAGGCTAGTAATTTCACAGTGTCACAATTTATTGAGGGGAATCTTTGGTTGCCTTCAACGGGTGTAACGTTCACTGCTGGATTGGGGGGTCTATGA 1578 0.4778 MALTSKKELSRIVTTLTTPTVTLIFFFVLFPSLYSAALGNTNTVGSELLKVAPSEFAGTVKTVVDVLQDVTSILSEFGSGFGDSRLSNAVSDCLDLLDMSSDELDWSVSATQSPQGKHNSTGNTSSDLRTWLSAALANQDTCMDGFNGTNGIVKGLVSTGLSQIMSLLQELLTQVNPSSDHFSFSTPQGQFPSWVKPGERKLLQANGVRFDAVVATDGTGNFTKVMDAVLAAPNYSMKRYVIYVKRGVYHENVEIKKKKWNLMMVGDGMDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAIFQNCQISAKKGLPNQKNTITAHGRKNPDEPTGFSIQFCNISADYDLVNSLNSTHTYLGRPWKPYSRTIFMQSYIGNVLRPEGWLEWNGDFALDTLYYAEYMNYGPGAGVANRVKWPGYHVMNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLGGL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01830 525 SMART PMEI_2 40 174 IPR006501 GO:0004857
Pumo2g01830 525 CDD PMEI-like_4 25 179 - -
Pumo2g01830 525 PANTHER PECTINESTERASE 58 512 - -
Pumo2g01830 525 Pfam Plant invertase/pectin methylesterase inhibitor 71 159 IPR006501 GO:0004857
Pumo2g01830 525 FunFam Pectinesterase 205 522 - -
Pumo2g01830 525 FunFam Pectinesterase 35 177 - -
Pumo2g01830 525 Gene3D - 209 524 IPR012334 -
Pumo2g01830 525 Pfam Pectinesterase 211 508 IPR000070 GO:0030599|GO:0042545
Pumo2g01830 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 164 IPR035513 -
Pumo2g01830 525 SUPERFAMILY Pectin lyase-like 209 521 IPR011050 -
Pumo2g01830 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 176 IPR035513 -
Pumo2g01830 525 NCBIfam pectinesterase inhibitor domain 59 165 IPR006501 GO:0004857
Pumo2g01830 525 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01830 Pumo-Chr2 34309733 34314244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01830 22 522 Carbohydrate Esterase AT3G43270 66.085 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01830 K01051 - gmx:100801813 946.806