Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01828 ATGGCTTATTCATCTCATAAACTCTTCTTCCTTCTGTTTGCAATCTTCTTCTCACACACTTGTGCTGTCAACTCTTCCAATGCTTCCACTACACTTCATACCAATCTCTCTTCCTTAAAATCTTTCTGCAGAACCAGCCCATACCCAGAAGTTTGTTTCAATTCATTGAAGCTATCCATCTCAATAAACATAAGTCCAAACATAATCAACTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCAAATCTCTTCCACAGTGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCAGGGAACTCCACCAATCCACTTTGGCTTCTTTGAAAAGATCACTGTCAGGGGTCCGTTCCTCCAACTCCAAGAACATAGTTGATGCAAGAGCCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCATCTCTGGTGAAATCTGTGATCAACACATACAAGCATGTCAGTAACTCACTTTCAATGCTCCCTAAGCCAGAGGTGGGGACTCCCAAAGGGAAAAAGAATAACCAGCCTTTGATGAATGCTCCAAAGTGGCTATCAAGCAGTGACCAAAGGCTCTTTCAAGACTCAGATGGGGAAGAAGAATATGACCCAGATGAAATGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTCAGCACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCATGGATAGGATAGTGATCTATGTCAAAGAAGGGATTTACGAGGAAAATGTGGAAATCCCAAGCTATAAGACCAACATTATGATGTTTGGCGATGGAAGTGATGTCACAGTCATAACTGGTAACAGAAGCGTCGGCGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTATCTCTGGTGATGGTTTTCTGGCACGTGATATTGCGATCGAGAACAGCGCAGGGCCAGAGAAGCATCAAGCAGTGGCCTTGAGGGTGAATGCAGACTTAACTGCCTTTTACAGGTGTGCAATTTATGGCTACCAAGACACTTTATATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTACATATTTGGGAATGCAGCAGTGATTCTACAAGAATGCAACATTATATCCAGAAAGCCATTGCCTAACCAATTCACAGTCATCACTGCACAATCCAGAGATAGCCCTGATGAGGACACTGGCATCTCATTCCAAAACTGCTCAATCATAGCCACCCTTGATCTCTATTCCAACTCTAGCAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTCTATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGGCAAAGTGGAATAATGAGCAAGGATTGGACAATTTGTATTACGGAGAGTATGACAACTATGGACCTGGTTCCAGCACAGATAAGCGTGTGCAATGGTTTGGGTACCATTTGATGGACTATGGTGATGCCTATAACTTCACAGTTTCGGAGTTCATCAATGGAGATGGTTGGCTTGATACTACTTCCGTGCCTTATGATGACGGGATTTGA 1629 0.4414 MAYSSHKLFFLLFAIFFSHTCAVNSSNASTTLHTNLSSLKSFCRTSPYPEVCFNSLKLSISINISPNIINYLLQSLQVAISETTKLSNLFHSVGHSNIIEKQRGAVQDCRELHQSTLASLKRSLSGVRSSNSKNIVDARAYLSAALTNKNTCLEGLDSASGTMKPSLVKSVINTYKHVSNSLSMLPKPEVGTPKGKKNNQPLMNAPKWLSSSDQRLFQDSDGEEEYDPDEMLVVAADGTGNFSTITEAINFAPNNSMDRIVIYVKEGIYEENVEIPSYKTNIMMFGDGSDVTVITGNRSVGGDGWTTFRSATLAISGDGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAVILQECNIISRKPLPNQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRVYSRTVYLESYIDDFIDPKGWAKWNNEQGLDNLYYGEYDNYGPGSSTDKRVQWFGYHLMDYGDAYNFTVSEFINGDGWLDTTSVPYDDGI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01828 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Pumo2g01828 542 PANTHER PECTINESTERASE 16 532 - -
Pumo2g01828 542 FunFam Pectinesterase 35 187 - -
Pumo2g01828 542 FunFam Pectinesterase 225 542 - -
Pumo2g01828 542 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Pumo2g01828 542 SUPERFAMILY Pectin lyase-like 230 539 IPR011050 -
Pumo2g01828 542 Gene3D - 227 542 IPR012334 -
Pumo2g01828 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Pumo2g01828 542 NCBIfam pectinesterase inhibitor domain 11 185 IPR006501 GO:0004857
Pumo2g01828 542 Pfam Pectinesterase 232 528 IPR000070 GO:0030599|GO:0042545
Pumo2g01828 542 CDD PMEI-like_3 41 184 - -
Pumo2g01828 542 MobiDBLite consensus disorder prediction 184 206 - -
Pumo2g01828 542 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Pumo2g01828 542 SMART PMEI_2 34 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01828 Pumo-Chr2 34228922 34231120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01828 20 542 Carbohydrate Esterase AT2G26440 65.725 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01828 - - gmx:100776969 1013.06