Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01827 ATGGCTTATTCTTATCATAAACTCTTCTTCCTTCTGTTTGCAATCTTCTCACAAACATGTATCAACTCTTCCAATGCTTCCACAACAGTTCAATCAAGATCTTTCTGCATAACCACCCCATACCCTGAAGTTTGTTTCAATTCATTGAACATCTCAATAGACACTGGTCCAAACACAAACAGCTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTGTTAAATCTCTTCAACAACGTTGGACACTCAGACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCAGGGAACTCCACCAATCCACATTGGTTTCTTTAAAAAGATCACTATCAGGGATCCCTTTCTCCAACATAACCATAATTGATGCAAGAATCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCATCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTCAGTAACTCTCTTTCAATTCTCTCAAACCCACAGATGGGGACTCCTGAAAAGCAGTCTTTGATGGGTGATCCAAAGTGGCCATCAAGCACTGACCAAGGGTTCTTTCATGATTCAGATGGGGAAGAATATGACCCAAATGAAGTGATTGTTGTGGCCGCAGATGGAACTGGGAAATTTAGGACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCAGGGTTAGGACAGTGATCCATGTCAAAAAAGGGATTTACGAGGAAAATGTGGAAATCCCAAGCTATAAGACCTACATTGTGATGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAGCAGAAGCGTAGGTGATGGATGGACCACTTACAATTCTGCAACTCTAGCGGTCTCTGGTGAAGGATTTCTGGCACGTGGTATAGCGGTTAACAACAGCGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTTACCGCTTTTTACAAGTGTGAAATTCATGGTTACCAAGACACTTTATGTGTTCACTCCTTCAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGGAATGCAGCAGTGGTTCTACAAAAATGTAACATCATATCCAAAAAACCATTGCCCGGCCAATTCACTGTTATCACTGCACAATCCAGAGATAGCCCAGAAGAGAGTACTGGCATCTCAATCCAATACTGCTCAATCAAAGCTAACTTTGATGACTCTAGTGTCAAGATCAAGAGCTACCTTGGGAGGCCATGGAGGGTATATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAGAGTGGAATAATAGTGACCAAGGATTGGACACATTGTATTACGGAGAGTATAACAATGATGGACCCGGTTCCAGCACAGACAACCGTGTACAATGGTCTGGGGATTTTATGATCACACAAAATAGCTTTGTTAGTTTGTTAACTGTTGCACTACTTACAATTGTCACTGTCCTCTGGCTTAAGGCCCTAAGCTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTGTTAAATCTCTTCAACAACGTTGGACACTCAGACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCAGGGAACTCCACCAATCCACATTGGTTTCTTTAAAAAGATCACTATCAGGGATCCCTTTCTCCAACATAACCATAATTGATGCAAGAATCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCATCTCTGGTGAAATCTGTGATCAACACGTACAAGCATGTCAGTAACTCTCTTTCAATTCTCTCAAACCCACAGATGGGGACTCCTGAAAAGCAGTCTTTGATGGGTGATCCAAAGTGGCCATCAAGCACTGACCAAGGGTTCTTTCATGATTCAGATGGGGAAGAATATGCCCCAAATGAAGTGATTCTTGTGGCTGCAGATGGAACTGGGAAATTCAGCACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCAGGGTTAGGACAGTGATCCATGTCAAAAAAGGGATTTACGAGGAAAATGTGGAAATCCCAAGCTATAAGACCTACATTGTGATGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAGCAGAAGCGTAGGTGATGGATGGACCACTTACAATTCTGCAACTCTAGCGGTCTCTGGTGAAGGATTTCTGGCACGTGGTATAGCGTTTAAGAACAGCGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTAACCGCTTTTTACAAGTGTGAAATTCATGGTTACCAAGACACTTTATGTGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATGTGGAAATGCAGCAGTGATTCTACAAGAATGTAACATTGTGTCCAAAAAACCATTGCCTGGCCAATTCACTGTTATCACTGCACAATCCAGAGAAAGCCCCAATGAGCCCACTGGCATTTCAATCCAAAACTGTTATATCACAGCTGCCACTGATCTGGATTCCAACTTCAAGAGCTTCCCTGGGAGGCCATGGAAGGCCTATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGAATAATAGTGAGCAAGGATTGGACACCTTGTATTACGGAGAGTATGACAATTATGGACCCGGTTCCAGCACAGACAATCGTGTGCAATGGTCTGGGTTCCATATAATGGGTTATCATGATGCCTATAATTTCACAGTTTCAGAGTTCATTAATAATAATGGACGTGATTGGCTTGAGTCTACTTTCTTTCCTTATGATGAAGGCATTGAAGGGATTTGA 2967 0.4338 MAYSYHKLFFLLFAIFSQTCINSSNASTTVQSRSFCITTPYPEVCFNSLNISIDTGPNTNSYLLQSLQVAISETTKLLNLFNNVGHSDIIEKQRGAVQDCRELHQSTLVSLKRSLSGIPFSNITIIDARIYLSAALTNKNTCLEGLDSASGTMKPSLVKSVINTYKHVSNSLSILSNPQMGTPEKQSLMGDPKWPSSTDQGFFHDSDGEEYDPNEVIVVAADGTGKFRTITEAINFAPNNSRVRTVIHVKKGIYEENVEIPSYKTYIVMLGDGSDVTVITGSRSVGDGWTTYNSATLAVSGEGFLARGIAVNNSAGPEKHQAVALRVNADFTAFYKCEIHGYQDTLCVHSFRQFYRECDIYGTIDFIFGNAAVVLQKCNIISKKPLPGQFTVITAQSRDSPEESTGISIQYCSIKANFDDSSVKIKSYLGRPWRVYSRTVYLESYIDDFIDPKGWTEWNNSDQGLDTLYYGEYNNDGPGSSTDNRVQWSGDFMITQNSFVSLLTVALLTIVTVLWLKALSYLLQSLQVAISETTKLLNLFNNVGHSDIIEKQRGAVQDCRELHQSTLVSLKRSLSGIPFSNITIIDARIYLSAALTNKNTCLEGLDSASGTMKPSLVKSVINTYKHVSNSLSILSNPQMGTPEKQSLMGDPKWPSSTDQGFFHDSDGEEYAPNEVILVAADGTGKFSTITEAINFAPNNSRVRTVIHVKKGIYEENVEIPSYKTYIVMLGDGSDVTVITGSRSVGDGWTTYNSATLAVSGEGFLARGIAFKNSAGPEKHQAVALRVNADLTAFYKCEIHGYQDTLCVHSFRQFYRECDIYGTIDFICGNAAVILQECNIVSKKPLPGQFTVITAQSRESPNEPTGISIQNCYITAATDLDSNFKSFPGRPWKAYSRTVYLESYIDDFIDPKGWTKWNNSEQGLDTLYYGEYDNYGPGSSTDNRVQWSGFHIMGYHDAYNFTVSEFINNNGRDWLESTFFPYDEGIEGI 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01827 988 SMART PMEI_2 27 174 IPR006501 GO:0004857
Pumo2g01827 988 SMART PMEI_2 481 633 IPR006501 GO:0004857
Pumo2g01827 988 CDD PMEI-like_3 34 178 - -
Pumo2g01827 988 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 519 635 IPR035513 -
Pumo2g01827 988 SUPERFAMILY Pectin lyase-like 671 982 IPR011050 -
Pumo2g01827 988 NCBIfam pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Pumo2g01827 988 NCBIfam pectinesterase inhibitor domain 522 635 IPR006501 GO:0004857
Pumo2g01827 988 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Pumo2g01827 988 Gene3D Invertase/pectin methylesterase inhibitor family protein 517 636 IPR035513 -
Pumo2g01827 988 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 177 IPR035513 -
Pumo2g01827 988 FunFam Pectinesterase 210 525 - -
Pumo2g01827 988 CDD PMEI-like_3 521 637 - -
Pumo2g01827 988 SUPERFAMILY Pectin lyase-like 214 496 IPR011050 -
Pumo2g01827 988 PANTHER PECTINESTERASE 522 975 - -
Pumo2g01827 988 FunFam Pectinesterase 669 985 - -
Pumo2g01827 988 Pfam Plant invertase/pectin methylesterase inhibitor 525 633 IPR006501 GO:0004857
Pumo2g01827 988 Pfam Plant invertase/pectin methylesterase inhibitor 33 174 IPR006501 GO:0004857
Pumo2g01827 988 Gene3D - 671 985 IPR012334 -
Pumo2g01827 988 Gene3D - 212 515 IPR012334 -
Pumo2g01827 988 Pfam Pectinesterase 676 968 IPR000070 GO:0030599|GO:0042545
Pumo2g01827 988 Pfam Pectinesterase 217 505 IPR000070 GO:0030599|GO:0042545
Pumo2g01827 988 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01827 Pumo-Chr2 34202133 34209628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01827 519 985 Carbohydrate Esterase AT2G26440 62.603 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01827 - - gmx:100776969 751.125