Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01810 ATGGATAGCGATGGAGGCTCCAAATTGAGTGGAATTAGGCAGATTGTGAGGCTAAAGGAAATGCTGCAGAAGTGGCAAAGTGTGACATTAGGCCCAAAAGCTTCCAATTCCATTTCTGATCATGTGACTAATGATAATGATGGGAGCATATCACCATTAATCAACAAAAGGGTAGTGAATGTGATGAATTGCGAATCGGACACCGAGGACGGTTGCCAAAGTCCTGCAGAACCGCTTCCGCCACCTGATGTTCCAGAAGGGTACTTGGCAGTGTATGTTGGACCAGAGCTTAGGAGGTTCATCATTCCCACCAGCTACCTCAGCCACTCTCTCTTCAAAGTTTTGCTGGAAAAGGCTGCAGAGGAATTTGGGTTTGATCAAAGTGGAGGCCTCACCATCCCATGTGAGACTGAGACCTTCAAGTACCTACTCAAGTGCATGGAGAATGAGCTGAAAGAGCAGCAACTCAGTGACAGCGCCCAAGATTTATCTTGGTTTTCCTCTTTGCCTTATTTCACTAACCTTCAGTCTTATGGTGAAACTGCAGCTGGAAGCTCAGGGACTGTGGAAGAGTAA 576 0.4653 MDSDGGSKLSGIRQIVRLKEMLQKWQSVTLGPKASNSISDHVTNDNDGSISPLINKRVVNVMNCESDTEDGCQSPAEPLPPPDVPEGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCETETFKYLLKCMENELKEQQLSDSAQDLSWFSSLPYFTNLQSYGETAAGSSGTVEE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01810 191 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 143 IPR003676 GO:0009733
Pumo2g01810 191 Pfam Auxin responsive protein 80 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01810 Pumo-Chr2 33844054 33845753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01810 1 162 Calmodulin-binding Proteins AT3G43120 62.963 7.46e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01810 K14488 - gmx:100527570 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01810 2 33844054 33845753 Pumo2g01810 2 33844054 33845753 ECH
Pumo4g00600 4 7918941 7921283 Pumo2g01810 2 33844054 33845753 PCT