Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01806 ATGCAACTCCAACTCACACTCTCCACTCTCTTCCTCACATTTTTGTTAACATTAACATCTCCAACCGTTTTTACGTTGGCAGCACAAAGCAAGCCGCAGGATCTGGTCCGGTCCTCGTGCGTGCACGCGCGGTACCCGCGTCTGTGCCTGCGCACGCTCTCCAACTACCCGGGCCCAGCCAACACGCCCCTGGATGTGGCCCGGGCCGCGCTGCGGGTCAGCCTGGCCCACACGCGCCGGGCCAGCAAGTTCCTCCACGCGCTCTCCAAGGGCGGCGCCGCCGCCATGGGCAAGAGGCAGCGCTCCGCGCTGCGCGACTGCAACGAGCAGATCTCGGACTCCGTCGACCAGCTCCGGCGGAGCCTCGCCGAGCTGCAGCACCTCCGGCCGGAGACGTTCCAGTGGCAGATGAGCAACGCCCTCACGTGGGTCAGCGCCGCCCTCACCGACGGCGACACCTGCCTCGACGGCTTCGGCGGGAATGCCAGGCCCGACGTCAAGCGCAGAGTCACGGATGTCGCCAGAGTCACTAGCAATGCTTTGTACATGATTAATAAGCTCGGTCAAAGTAGGACTGGAAAGCCCAAGCCCAAGTCAAAGCCCAGGCCCAAGCCCAGGCCCAGGCCTCAGCCTCGCTATGCCTCAAGTACCGAGAAATTGAATTAG 666 0.6321 MQLQLTLSTLFLTFLLTLTSPTVFTLAAQSKPQDLVRSSCVHARYPRLCLRTLSNYPGPANTPLDVARAALRVSLAHTRRASKFLHALSKGGAAAMGKRQRSALRDCNEQISDSVDQLRRSLAELQHLRPETFQWQMSNALTWVSAALTDGDTCLDGFGGNARPDVKRRVTDVARVTSNALYMINKLGQSRTGKPKPKSKPRPKPRPRPQPRYASSTEKLN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01806 221 CDD PMEI-like_3 38 187 - -
Pumo2g01806 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 187 IPR035513 -
Pumo2g01806 221 Pfam Plant invertase/pectin methylesterase inhibitor 34 182 IPR006501 GO:0004857
Pumo2g01806 221 FunFam Pectinesterase inhibitor 3 31 188 - -
Pumo2g01806 221 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 182 - -
Pumo2g01806 221 MobiDBLite consensus disorder prediction 185 221 - -
Pumo2g01806 221 Coils Coil 108 128 - -
Pumo2g01806 221 MobiDBLite consensus disorder prediction 193 207 - -
Pumo2g01806 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 188 IPR035513 -
Pumo2g01806 221 SMART PMEI_2 31 183 IPR006501 GO:0004857
Pumo2g01806 221 NCBIfam pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01806 Pumo-Chr2 33723304 33724532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01806 31 195 Carbohydrate Esterase AT5G53370 30.814 1.40e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01806 - - gmx:100816686 350.517