Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01799 ATGGTGAAGCCGATGAGCGTGGAAAAACCTGCGGAGGAACGAAGTGTTTCATCGTCGTACAGAGGAGTACGGAAGAGGAAGTGGGGGAAATACGTGTCGGAAATTAGGCTACCCAACTGCCGTCAAAGGATTTGGTTGGGTTCCTACGACAGCGCCGAGAAGGCGGCGCGTGCGTTCGATGCGGCCATGTTCTGCTTACGTGGCAGCGGCGCCAGGTTTAATTTCCCGAGCGACCCGCCAAACATCGCCGGCGGGAGAAACATGACGCCCTCTCAGATTCAGATCGCCGCGGCTCGTTTCGCCAATTCGGAGCCCCCAAAGGAGTGTTCGGGTTCGGGTTCGGGTTCGGGTCAACCCGTTGAGTCTTTAACTTCGGATGCTGAAACGACGTCGTCGTTGCCTTTGGACAGTATTAGTAATAATACTGATACATCGTCTCCTCCTTTTTCAGACGTGACGGTCCAAAACGACACCGAATTACTATCGTTTCCGGATCTGTTTTCGGATCTCGGGTCGGGTAATTTAATACCCGATTTCTCCGATTTTCCGAGCTTTGACGATTTCAGCCGCGATTTCTTCGTGCCGGAGATTACAAGTTTCGATTACGGAGAAGAGAACTTGGATGGGTTGATAATTCAGGACTCGTTCTTGTGGAATTTCTAA 663 0.5158 MVKPMSVEKPAEERSVSSSYRGVRKRKWGKYVSEIRLPNCRQRIWLGSYDSAEKAARAFDAAMFCLRGSGARFNFPSDPPNIAGGRNMTPSQIQIAAARFANSEPPKECSGSGSGSGQPVESLTSDAETTSSLPLDSISNNTDTSSPPFSDVTVQNDTELLSFPDLFSDLGSGNLIPDFSDFPSFDDFSRDFFVPEITSFDYGEENLDGLIIQDSFLWNF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01799 220 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Pumo2g01799 220 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Pumo2g01799 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 166 - -
Pumo2g01799 220 MobiDBLite consensus disorder prediction 1 20 - -
Pumo2g01799 220 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Pumo2g01799 220 MobiDBLite consensus disorder prediction 101 151 - -
Pumo2g01799 220 MobiDBLite consensus disorder prediction 107 151 - -
Pumo2g01799 220 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Pumo2g01799 220 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Pumo2g01799 220 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Pumo2g01799 220 MobiDBLite consensus disorder prediction 1 24 - -
Pumo2g01799 220 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Pumo2g01799 220 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Pumo2g01799 220 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01799 Pumo-Chr2 33591883 33593016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01799 15 220 AP2-EREBP Transcription Factor Family AT1G19210 45.581 3.80e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo2g01799 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01799 - - gmx:100802508 313.153