Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01797 ATGTCGAGCTCATCGGAATACTCTGAATTTTCCGGCCAGAAACCGGCGAGGTCGCTGGAGAAGTCGAGTTTCTCTCAGACTTGCAGTCTGTTGAGTCAATACATCAAGGAGAGGGGTAGCTTCGGAGATCTTACCCTCGGTATGACATGCAACACCGAACCATGTGGGTCACCTGAGACATCTTGTCAATCTGCTACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGGCACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGGTTCCTATCGTCCCTCTGAGGAGATTCCAACCTTGGTTAATTCCTGTGCAATTAAGTCTGTGAACAAGGGTGCTAAAACTGCACAGATGACTATCTTTTATGGTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAATGAGATCATGTCCTATGCCACCAAAGGGATCCCCCAAAGGGAGAACAATTCTGTTTTCACCTACACACACAGCCAGCCATCTTTTCCTCCTAGTTTGGTCAGAACCTCTGCTGATTCAAGTGCGCCAATTATTCCTAGTGTGAATATTACCAACAACATGCATGAACACCCTCAAGCATCATCCAGACCTGTTGTTTGTGATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCTCCATATCAAGTAATAAATGGGCCTTCTAACAAGCCAGTTGAATCCATGCCATGGCTTGGGCTGAGTGCTTCTTCACCTCAAATCTGA 786 0.4555 MSSSSEYSEFSGQKPARSLEKSSFSQTCSLLSQYIKERGSFGDLTLGMTCNTEPCGSPETSCQSATTMNLFPTKENNVAPKNLTAMDLLSPQGSYRPSEEIPTLVNSCAIKSVNKGAKTAQMTIFYGGQVVVFDDFPADKANEIMSYATKGIPQRENNSVFTYTHSQPSFPPSLVRTSADSSAPIIPSVNITNNMHEHPQASSRPVVCDLPIARKASLHRFLEKRKDRIASKAPYQVINGPSNKPVESMPWLGLSASSPQI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01797 261 SMART tify_2 115 150 IPR010399 -
Pumo2g01797 261 Pfam Jas motif 211 236 IPR018467 -
Pumo2g01797 261 MobiDBLite consensus disorder prediction 240 261 - -
Pumo2g01797 261 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 242 IPR040390 -
Pumo2g01797 261 Pfam tify domain 118 148 IPR010399 -
Pumo2g01797 261 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01797 Pumo-Chr2 33553322 33556070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01797 1 256 Tify Gene Family AT1G19180 42.537 8.01e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pumo2g01797 tify 5.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01797 K13464 - gmx:100801449 445.277