Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01788 ATGGCTTTAGCCCTTTCCTCCACCGCATTGTCAACTCTCCCAAACAGAGAAATTCGTCAAAAGGTTTTCCCCGAAAGAACACCCACATGCTTGAGTCTGAGCAAAAGAACAATTGCAAATGCAACAAAAGGAGTGTCAGCTGTCTGTGAGCCACTTCCTCCAGACAGGCCATTGTGGTTCCCTGGTAGCTCACCTCCTGAGTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGTTTCGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTCAAGTGGTTTGCTCAGGCAGAACTAATGCATGCAAGATGGGCAATGCTTGCAGTGTTCGGAATTCTCGTTCCAGAGTTACTTGAAAAAATTGGTTATATTGAGAACTTCTCATGGTACGATGCTGGTGCGCGAGAGTACTTTGCGGACCCCACAACCTTGTTCGTTGTGCAAATGGGCCTGATGGGCTGGGTGGAGGGTCGAAGATGGGCCGATATAGTCAACCCAGGGAGTGTTGACATTGAGCCCAAAGTGCCACATATTACGAACCCGAAGCCTGATGTTGGGTACCCCGGCGGGTTGTGGTTTGACCCAATGATGTGGGGGCGAGGGTCACCCGAGCCAGTGATGGTGTTGAGGACCAAGGAGATCAAGAATGGAAGACTTGCAATGCTGGCCTTTGTTGGGTTCTGGTTCCAAGCTATTTACACTGGGGAAGGACCCATTGAAAATTTGATGGCACACATTGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACGCGGTAG 783 0.5019 MALALSSTALSTLPNREIRQKVFPERTPTCLSLSKRTIANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLEKIGYIENFSWYDAGAREYFADPTTLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHIADPGHCNIFSAFTR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01788 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 259 IPR001344 GO:0009765|GO:0016020
Pumo2g01788 260 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
Pumo2g01788 260 SUPERFAMILY Chlorophyll a-b binding protein 55 258 - -
Pumo2g01788 260 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Pumo2g01788 260 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01788 Pumo-Chr2 33448159 33451177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01788 54 259 Chloroplast and Mitochondria Gene Families AT3G61470 68.447 1.26e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01788 K08908 - gmx:100812066 530.406