Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01787 ATGGCCGCTGTTCGCGTCCACCGCCACCTCTCGTTCCTCTTCCTCTTCTTGTTCTTGTCTTTCTCCTTCGCAACCGAAACCCAATCCCTCCTCCGCCTCAAGCAATCCCTCGCCAACTCCGACCGCTCCCTCTCCTCCTGGATCCCGAACGTCTCCCCTTGCTCCGGCACGTGGCTCGGCGTGGTCTGCTTCGACAACGTCATCACGGGCCTCCACCTCTCCGACCTGGGCCTCTCCGGCCCAATCGACGTCGACGCCCTCGCCGAGATCCGCGGCCTCCGCACCCTCAGCTTCATCAACAACTCCTTCTCCGGCCCAATCCCAAGCTTCAACAAACTCGGCACCATCAAGTCCCTCCTCTTGACCCAAAACCGCTTCTCCGGAACCATCCCCAACGACTTCTTCTCCCCGTTGAATTCCCTCAAGAAACTCTGGCTCTCGGGTAACAACTTCACGGGCAACATCCCCCAATCCTTAACCGAACTCGATCTCCTCAAGGAACTCCACCTCGAATACAACGCCTTCTCCGGCCCAATCCCGAACTTCAACCAAGATTTAAAATCCCTGGACCTGTCCAACAACAAACTCAACGGTAAGATTCCTGAGAGCTTGGCGAAATTCAATGCGGGCTCGTTTGCTGGAAATGAAGGCCTCTGCGGGAAGCCATTGGAGAAGCCTTGTGATGATGATGATGATTCTTCTTCTTACTCGTTGCCGAGTAATGTGAACAATGATGACACGTACGGTTCAGGCTGGGCGGCGAAGGTGATTGTCATACTGGTGATAGCGGTGGTGGCGGCGGTGATATTTCTGTTCGAGACGCGGAGGAGGAGGGAGGGGGATTTCAGGGCGGTGAGCAGGAGCAACAGCGCGGAGGAGGTGCTGACGGTGGAGGTGCCGAGCGTGAGGGCGGGCGCAGGGGAAAAGAGGGAGTCAAACAAGAGAGGGGAGATTGTGATGGTGAACGAGGAGAGGGGCGTGTTTGGGTTGCAGGACATGATGAAGGCCTCGGCGGAGGTGCTCGGGAACGGGGGGCTGGGGTCGGCTTACAAGGCGGCGATGGCGATGGGGCTGTGCGTGGTGGTGAAGAGGATGAGGGAGATGAACAAGATTGGGAAGGACGTGTTTGACGCCGAGATGAGGCAGTTTGGGAGGATACGACACCGTAACGTCATGACACCGCTCGCTTACCATTACCGCAGAGAGGAGAAGCTCTTCATCAACGAGTACATGCCCAAGGGAAGCTTGTTGTATGTCTTGCATGGTGACAGAGGAACATCCCATTCTGAGCTAACTTGGCCTACACGTTTGAAGATCGTTAAGGGAATTGCAAGAGGGTTGAAATTCCTTTACACTGAATTTTCCACCTACGACCTGCCCCACGGGAACCTCAAGTCCAGCAACGTTCTCCTAACTGATGATTACGAGCCTCTCTTGAGTGACTATGCCTTTCAGCCACTAATCAACCCCAACGTTGCCGTGCAGGCATTGTTCGCCTTCAAATCCCCAGATTACATACAGAACCAGAAAGTTTCACAGAAGACCGATGTTTATTGCCTTGGCATCATCATTCTTGAAATCATCACAGGCAAGTTCCCTGCCCAGTATCACAGCAATGGCAAGGGTGGCACTGATGTTGTGCAATGGGCCCACACCGCAATTTCTGAGGGAACAGAAGCCGAGTTGATCGATTCGGAGTTGCCAAACGACGCGAATTCGCACCACAACATGCTGCAACTTCTCCACATCGGAGCTGCTTGCACCGAAAGCAACCCGGAACAAAGACTAAAAATGAAGGAAGCTATTAGAAGGATAGAGGAAGTACAGGTTTAA 1833 0.5412 MAAVRVHRHLSFLFLFLFLSFSFATETQSLLRLKQSLANSDRSLSSWIPNVSPCSGTWLGVVCFDNVITGLHLSDLGLSGPIDVDALAEIRGLRTLSFINNSFSGPIPSFNKLGTIKSLLLTQNRFSGTIPNDFFSPLNSLKKLWLSGNNFTGNIPQSLTELDLLKELHLEYNAFSGPIPNFNQDLKSLDLSNNKLNGKIPESLAKFNAGSFAGNEGLCGKPLEKPCDDDDDSSSYSLPSNVNNDDTYGSGWAAKVIVILVIAVVAAVIFLFETRRRREGDFRAVSRSNSAEEVLTVEVPSVRAGAGEKRESNKRGEIVMVNEERGVFGLQDMMKASAEVLGNGGLGSAYKAAMAMGLCVVVKRMREMNKIGKDVFDAEMRQFGRIRHRNVMTPLAYHYRREEKLFINEYMPKGSLLYVLHGDRGTSHSELTWPTRLKIVKGIARGLKFLYTEFSTYDLPHGNLKSSNVLLTDDYEPLLSDYAFQPLINPNVAVQALFAFKSPDYIQNQKVSQKTDVYCLGIIILEIITGKFPAQYHSNGKGGTDVVQWAHTAISEGTEAELIDSELPNDANSHHNMLQLLHIGAACTESNPEQRLKMKEAIRRIEEVQV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01787 610 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Pumo2g01787 610 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Pumo2g01787 610 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Pumo2g01787 610 Gene3D Phosphorylase Kinase; domain 1 302 410 - -
Pumo2g01787 610 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Pumo2g01787 610 Gene3D Transferase(Phosphotransferase) domain 1 411 610 - -
Pumo2g01787 610 SUPERFAMILY L domain-like 25 207 - -
Pumo2g01787 610 Gene3D Ribonuclease Inhibitor 23 183 IPR032675 -
Pumo2g01787 610 SUPERFAMILY Protein kinase-like (PK-like) 339 605 IPR011009 -
Pumo2g01787 610 Pfam Protein kinase domain 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01787 610 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01787 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 609 IPR046959 -
Pumo2g01787 610 Pfam Leucine Rich Repeat 186 206 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01787 Pumo-Chr2 33434726 33437095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01787 11 610 Receptor kinase-like Gene Family AT3G42880 49.216 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo2g01787 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01787 - - gmx:100790660 977.622