Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01785 ATGTTTGGAGTTACACAAATGCATTTGCTGAGCATGGAAGAAAATCTAAGACCAAGTTGCAGATCTGGAGACATGCTTGGAATGAATCTGCTGGTTTATCTGGAATTGAATCATCAAATTTTCGATGTAGTAGAATCATTGATATGCAAAGAGCCAGAAGACATCATTGAAATTTGGGGCATGGGTGGTATCGGCAAAACAACCTTAGCAGAAGAAGTATTTAACAAACAACAATGTGAATACGAAGGTTGTTATTTTTTAGCAAATGGAAGAGAACAATCGAGCAAACATGAAATAATTTCTTTGAAGGATATTGTGAAAATTGACACACCAAATTGGTTGTCCGATGATATCTTTAGAAGAATTGGTTGTGTGAAGGTTCTTATTGTTCTTGATGATCTGAATGCTTAG 411 0.3552 MFGVTQMHLLSMEENLRPSCRSGDMLGMNLLVYLELNHQIFDVVESLICKEPEDIIEIWGMGGIGKTTLAEEVFNKQQCEYEGCYFLANGREQSSKHEIISLKDIVKIDTPNWLSDDIFRRIGCVKVLIVLDDLNA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01785 136 PRINTS Disease resistance protein signature 121 135 - -
Pumo2g01785 136 PRINTS Disease resistance protein signature 55 70 - -
Pumo2g01785 136 Gene3D - 29 136 IPR027417 -
Pumo2g01785 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 135 IPR027417 -
Pumo2g01785 136 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 135 IPR044974 GO:0006952
Pumo2g01785 136 Pfam NB-ARC domain 42 133 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01785 Pumo-Chr2 33430499 33431515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01785 24 135 WRKY Transcription Factor Family AT4G12020 30.645 4.26e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01785 - - ccaj:109793527 120.938