Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01757 ATGAAGCCAATTCTGGTGAAATCTGTGGTCAACACTTACAAACATGTCAGTAACTTTCTTTCAATTCTTTATAACCCAGAGATGGGAACTCCTGAAAACCAGTCTTTGATGGGTGATCCAAAGTGGCTATCAAGCACTGACCAAGGGTTCTTTCAAGACTCAGATGGGGAAGAATATGACCCAAATGAAGTGATTGTTGTGGCTGCAGATGGAACTGGGAAATTTAGGACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCGGATCAGCTAGGACAGTGATCCGTGTCAAAGAAGGGAATTACGAGGAAAATGTGAAAATCCCAAGGTATAAGACCAACATTGTGATGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAGCAGAAGTGCAGGTGATGGATGGACCACTTACAATTCTGCATCTCTAGCGGTTCTTGGTGATGGCTTTCTGGCACGTGGTATAGCGTTTAAGAACAGCGCACGGCCAGAGAAGTACCAAGCAGTGGCCTTGTTGGTAGATGCAGACTTAACTGCTTTTTACAAGTGTGCAATTCATGGTTACCAAGACACTTTATTTGTTCACGCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGATTCTACAAGAATTTGCCACTGATCTGGATTCCAACTTCAAGAGCTTCCTTGGGAGGCCATGGAAGGCCTATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGAATAATAGTGAGCAAGGATTGGACACCTTGCATTACGAAGAGTATGACAATTATGGACCCGGTTCCAGCACAGATAATCGTGTGCAATGGTCTGGGTTCCATATAATGGGTTATGATGATGCCTATAATTTCACAGTTTCAGAGTTCATTAATAATAATGGACATGATTGGCTTGAGTCTACTTTCTTTCCTTATGATGAAGGCATTGAAGGGATTTGA 1023 0.4252 MKPILVKSVVNTYKHVSNFLSILYNPEMGTPENQSLMGDPKWLSSTDQGFFQDSDGEEYDPNEVIVVAADGTGKFRTITEAINFAPNNSGSARTVIRVKEGNYEENVKIPRYKTNIVMLGDGSDVTVITGSRSAGDGWTTYNSASLAVLGDGFLARGIAFKNSARPEKYQAVALLVDADLTAFYKCAIHGYQDTLFVHAFRQFYRECDIYGTIDFIFGNAAVILQEFATDLDSNFKSFLGRPWKAYSRTVYLESYIDDFIDPKGWTKWNNSEQGLDTLHYEEYDNYGPGSSTDNRVQWSGFHIMGYDDAYNFTVSEFINNNGHDWLESTFFPYDEGIEGI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01757 340 Gene3D - 228 339 IPR012334 -
Pumo2g01757 340 Gene3D - 32 227 IPR012334 -
Pumo2g01757 340 FunFam Putative pectinesterase 57 62 234 - -
Pumo2g01757 340 PANTHER PECTINESTERASE 11 226 - -
Pumo2g01757 340 ProSitePatterns Pectinesterase signature 2. 209 218 IPR033131 -
Pumo2g01757 340 Pfam Pectinesterase 65 226 IPR000070 GO:0030599|GO:0042545
Pumo2g01757 340 Pfam Pectinesterase 232 320 IPR000070 GO:0030599|GO:0042545
Pumo2g01757 340 SUPERFAMILY Pectin lyase-like 62 334 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01757 Pumo-Chr2 32957687 32959041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01757 1 337 Carbohydrate Esterase AT2G26440 55.670 1.93e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01757 - - gmx:102665651 493.426