Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01756 ATGGCTTATTCTTATCATAAACTCTTCTTCCTTCTGTTTGCAATCTTCTCACAAACTTGTATAAACTCTTCCAATGCTTCCACAACAGTTCAATTAAGATCTTTCTGCATAACCACCCCATACCCAAAAGTTTGTTTCAGTTCATTGAACATCTCAACAGACACAATTCCAAACACAAACAGCTACCTCCTTCAGTCCCTCCAAGTAACAATATCTGAAACCACAAAGCTGTTAAATCTCTTCAACAATGTTGGACACTCAGACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCAGGGAACTCCACCAATCCACATTGGTTTCTTTAAAAAGATCACTATCAGGGATCCGTTTCTCCAACATAACCATAATTGATGCAAGAATCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCAGTTCTGGTGAAATCTGTGGTCAACACTTACAAACATGTCAGTAACTCTCTTTCAATTCTCTCTAACCCAGAGATGGGGACTCCTGAAAACCAGTCTTTGATGGGTGATCCAAAGTGGCTATCAAGCACTGACCAAGGGTTCTTTCAAGACTCAGATGGGGAAGAATATGACCCAAATAAAGTGATTGTTGTGGCTGCAGATGGAACTGGGAAATTTAGGACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCAGGGTTAGGACAGTGATCCATGTCAAAAAAGGGATTTACGAGGAAAATGTGGAAATCCCAAGCTATAAGACCAACATTGTGATGCTTGGCGATGGACGTGATGTCACTGTCATAACTGGTAGCAGAAGCGTAGGTGATGGATGGACCACTTACAATTCTGCAACTCTAGCGGTCTCTGGTGAAGGATTTCTGGCACGTGGTATAGCGTTTAAGAACAGCGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTAACCGCTTTTTACAAGTGTGCAATTCATGGTTACCAAGACACTTTATGTGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATTTTTGGGAATGCAGCAGTGGTTCTACAAAAATGTAACATCATATCCAAAAAACCATTGCCTGGCCAATTCACTGTTATCACTGCACAATCCAGAGATAGCCCAGATGAGAATACTGGCATCTCAATCCAATACTGCTCAATCAAAGCTAAATTTGATGACTCTAGTGTCAATATCAAGAGCTACCTTGGGAGGCCATGGAGGGTATATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAGAGTGGAATAATAGTGACCAAGGATTGGACACATTGTATTACGGAGAGTATAACAATGATGGACCCGGTTCCAGCACAGACAACCGTGTACAATGGTCTGGGTACCATGTAATGGACTATGGTGATGCATTTAAGTTCACAGTTTCACAGTTCATTAATAATGCGCGTGATTGGCTTGAGTCTACTTTGTTTCCCTTTGTTGAAGGGATTTTATGA 1584 0.4223 MAYSYHKLFFLLFAIFSQTCINSSNASTTVQLRSFCITTPYPKVCFSSLNISTDTIPNTNSYLLQSLQVTISETTKLLNLFNNVGHSDIIEKQRGAVQDCRELHQSTLVSLKRSLSGIRFSNITIIDARIYLSAALTNKNTCLEGLDSASGTMKPVLVKSVVNTYKHVSNSLSILSNPEMGTPENQSLMGDPKWLSSTDQGFFQDSDGEEYDPNKVIVVAADGTGKFRTITEAINFAPNNSRVRTVIHVKKGIYEENVEIPSYKTNIVMLGDGRDVTVITGSRSVGDGWTTYNSATLAVSGEGFLARGIAFKNSAGPEKHQAVALRVNADLTAFYKCAIHGYQDTLCVHSFRQFYRECDIYGTIDFIFGNAAVVLQKCNIISKKPLPGQFTVITAQSRDSPDENTGISIQYCSIKAKFDDSSVNIKSYLGRPWRVYSRTVYLESYIDDFIDPKGWTEWNNSDQGLDTLYYGEYNNDGPGSSTDNRVQWSGYHVMDYGDAFKFTVSQFINNARDWLESTLFPFVEGIL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01756 527 Pfam Plant invertase/pectin methylesterase inhibitor 32 174 IPR006501 GO:0004857
Pumo2g01756 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 177 IPR035513 -
Pumo2g01756 527 SMART PMEI_2 27 174 IPR006501 GO:0004857
Pumo2g01756 527 CDD PMEI-like_3 34 178 - -
Pumo2g01756 527 FunFam Pectinesterase 210 526 - -
Pumo2g01756 527 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Pumo2g01756 527 NCBIfam pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Pumo2g01756 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 176 IPR035513 -
Pumo2g01756 527 Gene3D - 212 526 IPR012334 -
Pumo2g01756 527 Pfam Pectinesterase 217 509 IPR000070 GO:0030599|GO:0042545
Pumo2g01756 527 SUPERFAMILY Pectin lyase-like 213 525 IPR011050 -
Pumo2g01756 527 PANTHER PECTINESTERASE 15 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01756 Pumo-Chr2 32948679 32950489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01756 12 526 Carbohydrate Esterase AT2G26440 60.225 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01756 - - gmx:100776969 798.119