Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01755 ATGGCGTTCCAGGATTTCGACCTCATCACCGAGCGGCGGAAGAACGAGCAGAGGCTCAAGATGAAGAAGAAGATCCTCATCAGCGTCGTCTCCGCCGTCCTCCTCGCCTGCGTCGTCGGCGCCGCGACGTTCGTCGTGGTCCAGAGGACAGGCCCCAGTAGCACCAAGGAGCCAACTCCAATGCCCCAAGCCACCGAAGAAGCCCACGTGGACCAGAACTCGAGGCTCGTGAAGATGATCTGCGGCTCCGCGGAGTACAAGGACAAATGTGAGAGCTCCCTCGGCGAGGCCCTGAAGAAGGACCCAAAATTGGCCCAGCCCAAGGACCTCATCATGGTGTCCATGATCCTCGCCGAGAACGAGTTCGACAAGGCCTTCAACGAAACTGCAAAAATGGACTTCGCGACCGAGGAGGAGAAGGGCGCGTACGAGGATTGCAAGGGCTTGTTCGAGGACGCTAAGGAGGAGCTCGGGATGTCGATCACCGAAGTCGGCGACAACGACGCGGACAAGCTCTCCACAAAGGGTGCTGAGTTGAACAACTGGCTCAGTGCCGTTATGTCTTACCAACAAACTTGCATTGACGGGTTCCCCGAAGGGAAGGTGAAAGACGATTTGAGCAACATGTTCAATGAGTCGAGGGAGCTTGTGAGCAATTCGCTCGCGGTTGTGTCGCAGTTCTCTTCCTTCTTTTCGATCTTCCAAGGCGCTGGGAAAGTTCACTTTCCTTGGGAGATAACCAATGATGATGCACCTGCTCCTGGTTCTGGTGCTGTGTTTGGTTCTGATCCTGCTTCTTTTGGTTATCCTATTGCTTCTGCTCCTGGTGTTGCTCCTGCTGCAGCTGCAGGTGCAGGTGCAGGTTCTGTTGCTCTTGCTCCTGGTGCGGCTCCTAGGTCCGCTCCTGGCCCAGTTCCTTCTTGGGCTGATGGCTCGATTCCTTCATGGGCTGCTACCCCAATTCCTGTTTGGGCCGGGCCTTCTGAGTTCAAGGGATCAGATGAGAAACCCACACCTAATGTCACCGTCGCACAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAAGCTTTGGCTGCCATCCCATCAACATACGAGGGCAGGTACGTGGTTTATGTTAAAGAAGGAGTGTACGATGAGACAGTGACAGTGACAAAGAAAATGGTAAACCTAACCATGTACGGTGACGGACAGCAAAAGAGTATTATCACTGGCAACAAAAATTATGTCGATGGAGTCAGGACATTCCAAACTGCATCATTTGTGGTACTTGGAGACGGATTCTTGGCCAAGGACATGGGATTCAGAAACACAGCCGGAGCAGCGAAGCACCAAGCAGTGGCAGCAAGAATCCAAGCCGACCAAGCCCTGTTTTTCAACTGCCAATTCGACGGCTACCAAGACACCCTCTACGCCCAAACCCACAGGCAGTTCTACCGCGACTGCGTGATCTCCGGCACAATCGACTTCATCTTCGGCGACGCCTCGGCCGTGTTCCAGAACTGCACCATGCTGGTAAGAAAGCCACTCGACAACCAGCAGAACATCGTGACGGCCCAGGGAAGACTCGACAAGCAGGAGAACACCGGCTTCGTCCTGCAGAAGTGCGTGATCAAGGCCGCCGACGAGCTCCTCCCCGTGAAGGGCAGAATCAAGAACTACCTCGGAAGGCCATGGAAGGAGTACTCGAGGACCATCATCATGGAGACTCAGATCGATGACCTCATTCACCCCGACGGGTTTCTTCCATGGGAAGGGAACTTTGCACTCACCACGCTTTACTATGGTGAGTACAACAACAATGGAGCTGGCTCCAGCACCGCTGCTAGGGTCAACTGGCCTGGCCGCAAGGTCATCAATAGGGATGAGGCCACCAGGTACACGGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACAGGTGTGCCAGCTCAACTTGGCTTGTACAATTAA 1956 0.5429 MAFQDFDLITERRKNEQRLKMKKKILISVVSAVLLACVVGAATFVVVQRTGPSSTKEPTPMPQATEEAHVDQNSRLVKMICGSAEYKDKCESSLGEALKKDPKLAQPKDLIMVSMILAENEFDKAFNETAKMDFATEEEKGAYEDCKGLFEDAKEELGMSITEVGDNDADKLSTKGAELNNWLSAVMSYQQTCIDGFPEGKVKDDLSNMFNESRELVSNSLAVVSQFSSFFSIFQGAGKVHFPWEITNDDAPAPGSGAVFGSDPASFGYPIASAPGVAPAAAAGAGAGSVALAPGAAPRSAPGPVPSWADGSIPSWAATPIPVWAGPSEFKGSDEKPTPNVTVAQDGSGNFKTISEALAAIPSTYEGRYVVYVKEGVYDETVTVTKKMVNLTMYGDGQQKSIITGNKNYVDGVRTFQTASFVVLGDGFLAKDMGFRNTAGAAKHQAVAARIQADQALFFNCQFDGYQDTLYAQTHRQFYRDCVISGTIDFIFGDASAVFQNCTMLVRKPLDNQQNIVTAQGRLDKQENTGFVLQKCVIKAADELLPVKGRIKNYLGRPWKEYSRTIIMETQIDDLIHPDGFLPWEGNFALTTLYYGEYNNNGAGSSTAARVNWPGRKVINRDEATRYTVEAFLQGTWINGTGVPAQLGLYN 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01755 651 SMART PMEI_2 72 223 IPR006501 GO:0004857
Pumo2g01755 651 ProSitePatterns Pectinesterase signature 2. 484 493 IPR033131 -
Pumo2g01755 651 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 227 IPR035513 -
Pumo2g01755 651 CDD PMEI-like_3 80 224 - -
Pumo2g01755 651 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 228 IPR035513 -
Pumo2g01755 651 FunFam Pectinesterase 73 228 - -
Pumo2g01755 651 Pfam Pectinesterase 340 635 IPR000070 GO:0030599|GO:0042545
Pumo2g01755 651 NCBIfam pectinesterase inhibitor domain 70 226 IPR006501 GO:0004857
Pumo2g01755 651 Gene3D - 335 649 IPR012334 -
Pumo2g01755 651 FunFam Pectinesterase 334 649 - -
Pumo2g01755 651 SUPERFAMILY Pectin lyase-like 338 644 IPR011050 -
Pumo2g01755 651 Pfam Plant invertase/pectin methylesterase inhibitor 76 222 IPR006501 GO:0004857
Pumo2g01755 651 PANTHER PECTINESTERASE 33 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01755 Pumo-Chr2 32928099 32931044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01755 321 651 Carbohydrate Esterase AT2G26450 59.524 3.88e-145 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01755 - K01051 gmx:100796485 1071.23