Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01754 ATGTCTGATGCAGTGGTTGGTGGTCACCTAGAGAATGCTCACAATTTATGCAGTCTCACAAGATATCCCAATCTATGTGCTGAAACCTTGATGGAATTGGGTTCAGGGAATCAAAATGTTGATAACATTGAGGCTCTTATCAACAAAACCATATTTGAAACCAACTTGCCAAGTTCATATTTTGCTGAATTCAAGACTGGGGATGCTCAACTTGCCCATTCTGTTGTTGCAGACTACTGTGAAGAGCTAATGAGCATGTCACTGAAAACGCTGGATCAATCACTGAGATCACTAAAATCCCCCAGAAGAAACACCAATGACATCCAAACATGGCTAAGTGCTTCTCTAACCTTCCAACAATCTTGCAAAGACCATGTACATGCACACACCTCAACACTCTCTGCAGATGATGACCTTATGCAAAGGATGTCCAACAAGATGGACTATCTCTCCCAATTGGGAAGCAACTCATTAGCCCTTGTTAACATGATGAGCACAACAACAACTAGCCACGAAATCGGTGCTAATAATGTAGAGAAACATGAATTTCCCAAATGGGTATCATCCAAAGGACGAAAACTGCTTCAGGGGGCCACCATAAAAGCAAATGCAATAGTTGCACAAGATGGTTCAGGAAACTACAAAACAGTTTCTGAAGCCATTGAGGCAGCTTCGGGGGCACGGTTTGTGATTTATGTTAAGGAAGGGGTTTACAAGGAGAAGATTCGCACCAACAAAGATGGTATCACCTTGATTGGAGATGGAAAATACTCTACTCTTATTGTTGGAGATGACAGCGTTGCCAAGGGTGCTACCTTACCTGACACCGCCACATTCACAATCACAGGCGACGGCTTCATCGCGCGAGACATCGGTTTCCACAACAACGCGGGCCCTTCGGGCCAACAGGCGGTGGCGCTAAACATCGCCTCCGACCGCTCCGTCCTCTACCGGTGCAGCATGGCGGGCTACCAAGACACCCTCTACGCGCACGCCCTCCGCCAGTTCTACCGAGAATGCGACATCTACGGCACCATCGACTTCATCTTCGGCAACGCGGCCGCGGTCTTCCAGCAATGCAACCTGGTCCTCCGCCGCCCCCAGGGCCGCGCCTACAACGCCGTCCTCGCCAACGGGAGAACCGACCCCGGACAGAACACCGGCTTCTCCGTCCACAAGTGCAGCATAATGCCGAGTTCGGATCTTTCCGCTGTGAAGCACTCTTATCTTTCGTTTCTGGGGAGGCCCTGGAAGGAGTACTCTAGGGCTGTGGTGATGGAGAGCAGCATAGACGACGCCGTTGCGGCGAGGGGGTGGATTGAGTGGCCCGGGTATGGAAGCTCTGTGTTGAAGACTTTGTATTTTGCAGAGTATGGGAATGAGGGACCCGGTGCTGGAACTGGCAAGAGGGTGCAGTGGCCTGGGTTTCGTGTTGTTGGGGCTCAGGAGGCTGTGAAGTTCACTGTTGCTAGTTTTATTGCTGGGAACTCGTGGATTCCCTCCACTGGGGTTGCTTTCATTTCAGGGCTTAATTAA 1536 0.5013 MSDAVVGGHLENAHNLCSLTRYPNLCAETLMELGSGNQNVDNIEALINKTIFETNLPSSYFAEFKTGDAQLAHSVVADYCEELMSMSLKTLDQSLRSLKSPRRNTNDIQTWLSASLTFQQSCKDHVHAHTSTLSADDDLMQRMSNKMDYLSQLGSNSLALVNMMSTTTTSHEIGANNVEKHEFPKWVSSKGRKLLQGATIKANAIVAQDGSGNYKTVSEAIEAASGARFVIYVKEGVYKEKIRTNKDGITLIGDGKYSTLIVGDDSVAKGATLPDTATFTITGDGFIARDIGFHNNAGPSGQQAVALNIASDRSVLYRCSMAGYQDTLYAHALRQFYRECDIYGTIDFIFGNAAAVFQQCNLVLRRPQGRAYNAVLANGRTDPGQNTGFSVHKCSIMPSSDLSAVKHSYLSFLGRPWKEYSRAVVMESSIDDAVAARGWIEWPGYGSSVLKTLYFAEYGNEGPGAGTGKRVQWPGFRVVGAQEAVKFTVASFIAGNSWIPSTGVAFISGLN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01754 511 FunFam Pectinesterase 11 165 - -
Pumo2g01754 511 SUPERFAMILY Pectin lyase-like 198 509 IPR011050 -
Pumo2g01754 511 Pfam Pectinesterase 203 496 IPR000070 GO:0030599|GO:0042545
Pumo2g01754 511 NCBIfam pectinesterase inhibitor domain 13 164 IPR006501 GO:0004857
Pumo2g01754 511 Gene3D - 197 510 IPR012334 -
Pumo2g01754 511 PANTHER PECTINESTERASE 14 500 - -
Pumo2g01754 511 Pfam Plant invertase/pectin methylesterase inhibitor 14 160 IPR006501 GO:0004857
Pumo2g01754 511 SMART PMEI_2 8 160 IPR006501 GO:0004857
Pumo2g01754 511 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 14 165 IPR035513 -
Pumo2g01754 511 CDD PMEI-like_3 16 166 - -
Pumo2g01754 511 Gene3D Invertase/pectin methylesterase inhibitor family protein 11 165 IPR035513 -
Pumo2g01754 511 ProSitePatterns Pectinesterase signature 2. 342 351 IPR033131 -
Pumo2g01754 511 FunFam Pectinesterase 197 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01754 Pumo-Chr2 32900838 32904616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01754 80 510 Carbohydrate Esterase AT2G45220 48.961 3.96e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01754 K01051 - gmx:100795439 907.131