Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01738 ATGGATAGCGATGGAGGCTCCAAATTGAGTGGGATTAAGCAGATTGTGAGGCTAAAGGAAATGCTCCAGAAGTGGCAAAGTGTGACATTAGGCCCAAAAGCTTCCAATTCCATTTCTGATCATGTGACTAATGATAATGATGGGAGCATATCACCATTAATCAACAAAAGGGTAGTGAATGTGATGAATTGCGAATCGGACACCGAGGACGGTTGCCAAAGTCCTGCAGAACCGCTTCCGCCACCTGATGTTCCAGAAGGGTACTTGGCTGTGTATGTTGGACCAGAGCTTAGGAGGTTCATCATTCCCACCAGCTACCTCAGCCACTCTCTCTTCAAAGTTTTGCTGGAAAAGGCAGCAGAGGAATTTGGATTTGATCAAAGTGGAGGCCTCACCATCCCTTGTGAGACTGAGACCTTCAAGTACCTACTCAAGTGCATGGAGAATGAGCTGAAAGAGCAGCAACTCAGTGACAGCGCCCAAGATTTATCTTGGTTTTCCTCTTTGCCTTATTTCACTAACCTTCAGTCTTATGGTGAAACTGCAGCTGGAAGCTCAGGGACTGTGGAAGAGTAA 576 0.4635 MDSDGGSKLSGIKQIVRLKEMLQKWQSVTLGPKASNSISDHVTNDNDGSISPLINKRVVNVMNCESDTEDGCQSPAEPLPPPDVPEGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCETETFKYLLKCMENELKEQQLSDSAQDLSWFSSLPYFTNLQSYGETAAGSSGTVEE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01738 191 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 143 IPR003676 GO:0009733
Pumo2g01738 191 Pfam Auxin responsive protein 80 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01738 Pumo-Chr2 32596552 32598258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01738 1 162 Calmodulin-binding Proteins AT3G43120 63.580 3.67e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01738 K14488 - gmx:100527570 275.789