Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01722 ATGGTGTGCAGTGCAATTAAGTCTGTGAACAAGGGTGCTAAAACTGCACAGATGACTATCTTTTATGGTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAATGAGATCATGTCCTATGCCACCAAAGGGATCCCCCAAAGGGAGAACAATTCTGTTTTCACCTACACACAGAGCCAGCCATCTTTTCCTCCTAGTTTGGTCAGAACCTCTGCTGATTCAAGTGCTCCAATTATTCCTAGTGTGAATATTACCAACAACATGCATGAACACCCTCAAGCATCATCCAGACCTGTTGTTTGTGATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCTCCATATCAAGTAACAAATGGGCCTTCTAACAAGCCAGTTGAATCCATGCCATGGCTTGGGCTGAGTGCTTCTTCACCTCAAATCTGA 474 0.4367 MVCSAIKSVNKGAKTAQMTIFYGGQVVVFDDFPADKANEIMSYATKGIPQRENNSVFTYTQSQPSFPPSLVRTSADSSAPIIPSVNITNNMHEHPQASSRPVVCDLPIARKASLHRFLEKRKDRIASKAPYQVTNGPSNKPVESMPWLGLSASSPQI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01722 157 Pfam Jas motif 107 132 IPR018467 -
Pumo2g01722 157 SMART tify_2 11 46 IPR010399 -
Pumo2g01722 157 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 137 IPR040390 -
Pumo2g01722 157 Pfam tify domain 14 44 IPR010399 -
Pumo2g01722 157 ProSiteProfiles Tify domain profile. 11 46 IPR010399 -
Pumo2g01722 157 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01722 Pumo-Chr2 32274129 32275045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01722 7 152 Tify Gene Family AT1G19180 41.333 3.79e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pumo2g01722 tify 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01722 K13464 - gmx:100801449 277.715