Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01709 ATGGCATTTGAGTCCAACGAAGTCTCAACGCTCCAATCCATATGCTACAAGCGCGGTTCCCTCCACCTTCTCGATCAGAGGAAGCTCCCTCTGGAGACAGTTTACTTGGAAATTCGGGATTCAACGGATGGCTGGAAGGCCATACGGGAAATGGTGGTCCGGGGAGCACCTGCTATTGCGATTGCAGCGGCACTCTCTTTGGCTGTGGAGGTGGTCAATTTAGATTTTAATGGGTCAGCTGCTGATGCTGTTTCCTTCCTGCAGAAGAAATTAGAATATCTTGTCACAAGTCGGCCAACTGCAGTGAACCTATCAGATGCTGCGACAAAACTCAAAGAAGTCATATCAAATGCTGCTGCTACCACTTCAGAGGGCAGGAATGTTTTCCAGGTGTATATAGATGCTACTGAAGTTATGCTTGAGGATGATGTTGCCTCAAATAGAGCTATTGGTTCTTATGGAGCAAGTATTATTCAACAACAAACAGAGAAACAAAAGCTTTCTGTTTTGACTCATTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTGATCCGTGCACTTCACAGTGCAGGAGTTCTAGAAAGGGCTTATTGCACAGAAACACGCCCATTCAATCAAGGATCTAGACTTACTGCCTTTGAGTTGGTGCATGAAAAAATACCAGGAACTCTTATTGCCGATTCTGCTGCAGCTGCATTAATGAAAGCAGGACGTGTGGATGCTGTTGTTGTTGGGGCAGATCGTGTTGCATCAAACGGCGACACAGCCAACAAGATTGGAACCTACAGCGTTGCCTTGTCCGCTAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTCACTTCCATTGATCTATCACTTTCTTCTGGACAAGAAATTGTCATCGAGGAGAGGTCTCCCAAGGAATTGCTGAACACACATGGAGGACTTGGAGAGCAGATTGCTGCCTCAGGAATTTCTGTGTGGAACCCGGCTTTTGATGTTACTCCTGCTAATCTAATATCTGGGATCATCACTGAGAAGGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAGGCTTTCGTACAGAAAACAGGTTAA 1113 0.4582 MAFESNEVSTLQSICYKRGSLHLLDQRKLPLETVYLEIRDSTDGWKAIREMVVRGAPAIAIAAALSLAVEVVNLDFNGSAADAVSFLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRNVFQVYIDATEVMLEDDVASNRAIGSYGASIIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAFELVHEKIPGTLIADSAAAALMKAGRVDAVVVGADRVASNGDTANKIGTYSVALSAKFHNVPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNTHGGLGEQIAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01709 370 FunFam Methylthioribose-1-phosphate isomerase 165 363 - -
Pumo2g01709 370 Gene3D - 9 199 IPR027363 -
Pumo2g01709 370 Pfam Initiation factor 2 subunit family 53 352 IPR000649 GO:0044237
Pumo2g01709 370 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 362 IPR005251 -
Pumo2g01709 370 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 8 367 - -
Pumo2g01709 370 FunFam Methylthioribose-1-phosphate isomerase 9 199 - -
Pumo2g01709 370 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 355 IPR037171 -
Pumo2g01709 370 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 39 353 IPR011559 GO:0044249
Pumo2g01709 370 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 12 353 IPR005251 -
Pumo2g01709 370 Gene3D - 200 365 IPR042529 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01709 50 368 Eukaryotic Initiation Factors Gene Family AT2G05830 77.882 2.15e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01709 K08963 - gmx:100799311 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01709 2 32062202 32066475 Pumo2g01709 2 32062202 32066475 ECH