Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01702 ATGACCCTTATGAAAACCCTATGGAAATCCATCTTCCCCGGTTGTTACAAGGGCGAGTACCCTTCCCCCAAGCCCAAGAAAGTGGTGGCCACGAAGCCAAACTCTTCTCACAGGATTTCTGTGACGGATTTGAGTTATCCAAGCACGACTCTCTCGGAGGATCTGTCCATTTCTCTAGCGGGAACTAACCTGCATGTTTTTTCACTCGCGGAGCTCAAGATTATCACGCAGCAATTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCGGTGCATAAGGGGTTCATTGATGACAAGCTTAGGCATGGTCTCAAGGCTCAACCCGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAGGTTGTTTTTCTGGGGCAACTAAGGCATCCACATCTCGTGAAGCTGATAGGATACTGTTGTGAAGAAGAGCACAGGGTTTTGGTATATGAATATTTACCAAGAGGCAGCTTGGAGAATCAATTATTTAGAAGATTCTCGGCATCACTAGCATGGTCAACGAGAATGAAAATTGCTGTTGGAGCTGCGAAGGGTCTAGCCTTTCTTCATGAAGCCGAGAAGCCAGTCATCTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTTATGGGCACACACGGCTACGCAGCTCCAGAATATGTCATGACAGGTCACTTGACAGCTATGAGTGACGTGTATAGTTTTGGAGTAGTGCTGTTGGAGCTGCTAACAGGGAGAAGGTCAGTGGACAAAACTCGCCCTCCAAGGGAACAGAACCTAGTGGATTGGGCAAGGCCAATGCTAAATGACTCTAGGAAACTCAGCAGAATAATGGATCCTAGACTTGAGGGCCAATATTCTGAGATGGGGACAAAAAAAGCAGCAGCATTGGCTTACCAGTGCCTCAGCCACAGGCCAAGGAGCAGACCCTCAATGAGCACAGTGGTCAAGACCCTTGAGCCACTCCAAGACTTTGATGACATTCCAATTGGAACATTTGTCTACACAGCTCCACCGGATAATAATAGTGAAGTGCATAATAATAGAGATGCAAAGGATCAATGTGAGACACCTAAGAGGAGGGAAAATAATAATAATAATGGTCACCTTCATAGGAACCACAGGCATCATCCACTTAAGTCCCCCAAGACCCCAAGGCCACAACAACAATCACAGTCACATTTGCGTTCAAGTGACCACAAACACCGAAATGGAAGAGGTAGTGGATCAAACTCTCCTCCATCATATGTCAAAAATAGGCCAGGAGTCATTGCCTATTAG 1392 0.4662 MTLMKTLWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSISLAGTNLHVFSLAELKIITQQFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRVLVYEYLPRGSLENQLFRRFSASLAWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKTRPPREQNLVDWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPDNNSEVHNNRDAKDQCETPKRRENNNNNGHLHRNHRHHPLKSPKTPRPQQQSQSHLRSSDHKHRNGRGSGSNSPPSYVKNRPGVIAY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01702 463 Gene3D Phosphorylase Kinase; domain 1 39 161 - -
Pumo2g01702 463 MobiDBLite consensus disorder prediction 382 406 - -
Pumo2g01702 463 CDD STKc_IRAK 85 359 - -
Pumo2g01702 463 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01702 463 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Pumo2g01702 463 FunFam Probable serine/threonine-protein kinase PBL8 162 374 - -
Pumo2g01702 463 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Pumo2g01702 463 PANTHER OS01G0588500 PROTEIN-RELATED 46 360 - -
Pumo2g01702 463 MobiDBLite consensus disorder prediction 373 463 - -
Pumo2g01702 463 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Pumo2g01702 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pumo2g01702 463 FunFam Serine/threonine-protein kinase BIK1 47 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01702 Pumo-Chr2 31942741 31946517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01702 65 381 Glycoside Hydrolase AT3G07070 51.875 1.32e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo2g01702 PK_Tyr_Ser-Thr 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01702 - - gmx:100783759 864.759