Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01691 ATGGAGGGCGGTGACGTTTGGCGTTGGGTGTTGGAGTTCCTTCTTTATCAGAATCGGAACCCACGCGTTCCCACGAACCTAATCAAGAATCTCCTTCTGATAATCCCCGCTTCAGACTTCGATTCCACTCTCAAGAAAACCCTTCTTCTCAGAACCCTTCAAGATCACTTGTACACCGTCTCCTTCCCCGAATCGATCCTCGAAACCCTCGAGCTCCTCGAGGAACTCCACCGCCGCGACGACTCTCCGATCTCCGCCGCCATGAGCGACGCCTACTGCGCCGTCGCGGTGGAGTGCACGCTCAAGTACCTGCTAGTGGAGCTCTGCAACCCTACCTTCATCGACGCGGTGAACAGGATATGGCTTGGTAGGGTTTGGCACATGAACAACTGTTCCGAGGAGGGAAGAAGAAGCCTTCTGCTCTCGCCGGAGTTGGAGCGGTGGAGACGCGACATCGAAACTTCGCTTTGGGACTTGCAAATGAGGGAGAGGTTGGCCTCCATTGATACCAGAAGGCATGCAGTCGTCAAGCTCAAGGCTTATTTGGACGAAGCATGGGCCAATTTGGGCCCTTCATTTCTTGAGATAGTGGCGGCGTTGATGCGCATGAACAATGCCCTAGCCGCGAACCACTCGGAGGCCCAACACCATGAGAGAGAAATTCAGGAGTGCACTGCTGCTGCCCAGGAAGGGCATTCCTCAAAAACTCTTGAGGTCCAAAAGGTTGCGGAATGCAATTTGGAAGTGAATGAAGAGGCACCTATTGAAAGTAGAGATGAAGATGTACCTTGCCCACATGTTATTAATAACAATGAGGCTGATCTGATGGAAGAGGATCAAACAGAAATTCAGAACTGCACTGCTGCTGCCGAGGAAGCGCATTCCTCAACAACTGTTGAGGTCCAAAAGGTTACGGAATGCAATGATTCTGTGGAGTTGCAAACGTTGGCTAAGGATTCTCTACTTAATTCATTGGAAGTGAATGAAGAGGAACCTATTGAAAGTAGAGATGAAGATGTACCTTGCCCACATGTTATTAATAACAATGAGGCTCATCTAATGGAAGAGGATCGAACAGAAATTCAGAAGTGCACTGCTGCTGCTGAGGAAGTGCACCCCTCAACAACTGTTGAGGTCCAAAAGGTTGTGGAATGCGATGATTCTGTGGAGTTGCAAAAGTTGGCTAAGAATTCTCTACTTAATTCATTGGAAGTGAATGAAGAGGAACCTATTGAAAGTAGAGATGAAGATGCACCTTGCCCACATGTTATTAATAACAATGAGGCTGATCTGATGGAAAAGGATCAAACAGAAATTCAGAAGTGCACTGCTGCTGCCGAGGAAGTGCATCCCTCAACAACTGTTGATGTCCAAAAGATTGCGGAATGCGATGATTCTGTGGAGTTGCAAAAGTTGGCTAAGGATTCTCTACTTAATTCATTAGAGGTGAATGAAGAGGCACCTATTGAAAGTAGAGATGAAGATGTACCTTGCCCACATGTTATTAATAACAATGAGGCTCATCTGATGGAAAAGGATCAAATTTCTGTGACTGTCCCTCATAATGATGACCATAGGCCAAGTTTAATGGAAAGAAATAGTACCGCTCGTGTTTACGAGTGGTATGATTCCATAGATGGCTTGGAAGATGGAACATCAAGTCATGCAAGTAGATTTCATTTGCCTAGCCCCAAGGAGAGAAAACTTTCTCCATTGAAAAAGTATAAACCAGCAAGCATTACAAAGAGGAGAAAACCAAAAAAATGGAGTCAGCTGGAAGAGGAGACCCTAAAGACTGCCGTAGACAAGTTTGGCAGGGGAAATTGGAAGTTAATCCTAGATTCTCACAAAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAAGACAAGTGGAGAAACATGACGCGTTAA 1914 0.4603 MEGGDVWRWVLEFLLYQNRNPRVPTNLIKNLLLIIPASDFDSTLKKTLLLRTLQDHLYTVSFPESILETLELLEELHRRDDSPISAAMSDAYCAVAVECTLKYLLVELCNPTFIDAVNRIWLGRVWHMNNCSEEGRRSLLLSPELERWRRDIETSLWDLQMRERLASIDTRRHAVVKLKAYLDEAWANLGPSFLEIVAALMRMNNALAANHSEAQHHEREIQECTAAAQEGHSSKTLEVQKVAECNLEVNEEAPIESRDEDVPCPHVINNNEADLMEEDQTEIQNCTAAAEEAHSSTTVEVQKVTECNDSVELQTLAKDSLLNSLEVNEEEPIESRDEDVPCPHVINNNEAHLMEEDRTEIQKCTAAAEEVHPSTTVEVQKVVECDDSVELQKLAKNSLLNSLEVNEEEPIESRDEDAPCPHVINNNEADLMEKDQTEIQKCTAAAEEVHPSTTVDVQKIAECDDSVELQKLAKDSLLNSLEVNEEAPIESRDEDVPCPHVINNNEAHLMEKDQISVTVPHNDDHRPSLMERNSTARVYEWYDSIDGLEDGTSSHASRFHLPSPKERKLSPLKKYKPASITKRRKPKKWSQLEEETLKTAVDKFGRGNWKLILDSHKDIFEERTEVDLKDKWRNMTR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01691 637 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 581 637 IPR017930 -
Pumo2g01691 637 CDD SANT_TRF 587 637 - -
Pumo2g01691 637 ProSiteProfiles Myb-like domain profile. 581 636 IPR001005 -
Pumo2g01691 637 SMART sant 585 637 IPR001005 -
Pumo2g01691 637 SUPERFAMILY Homeodomain-like 583 636 IPR009057 -
Pumo2g01691 637 Gene3D - 578 637 - -
Pumo2g01691 637 PANTHER MYB TRANSCRIPTION FACTOR 433 637 - -
Pumo2g01691 637 Pfam Myb-like DNA-binding domain 587 635 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01691 Pumo-Chr2 31806987 31812918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01691 549 635 Single Myb Histone (SMH) Gene Family AT1G15720 42.529 1.51e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo2g01691 Myb_DNA-binding 5.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01691 - K11111 gmx:100777809 421.394