Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01678 ATGAAGATGAGAGTGATCAGAAAGATAATGAAATTACTAGTGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTCGGGAATGTATATTGAGAAGGATGACCTCTTGCGATTCATGAAAAATGAAGAAGTGGAAAATGTGCTTCCACTATTTGAAGGGGCAGTTGAGACTGGAAGAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTTGAACGCCGATCACTTGTACATTCACTAAATGATACCAAAACAGCTGTTGATGACTTGAATGTGCTTGCTTCTGTAATTGTGCTTATTGTGATCACTATTGTGTGGCTTCTTATAATGGGTTTCTTAAACACTCAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGTTTTCATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCCATTATATTTGTTTTTGTGATGCACCCGTTTGATGTTGGTGATCGCTGTGTCATTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATATTAACTACAGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAAGCAAGCCTATCAGCAACTTCTACAGGAGTCCAGAAATGAGTGATTCGGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCGAAGTTAAAAGCATATTTGGAGAGTAAGCCTCAACACTGGCGCCCCAACCACATTGTATTGGTTAAGGATATCAAGAATGTAAATAAGATAACAATGCGTCTACGTGTTACTCACACCATAAGTTTTCAGAACTATGGAGATAGGAACAGCCGAAGATCTGAATTAGTCCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCTGCCACAAGAAATTCATATCAGTTATGTAAGGTCAGAAGACTCAACAGCACGAACATTTTGA 972 0.3755 MKMRVIRKIMKLLVSGKQRQLLIEFSGMYIEKDDLLRFMKNEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYLERRSLVHSLNDTKTAVDDLNVLASVIVLIVITIVWLLIMGFLNTQVLVFISSQLLLVVFMFGNTAKTVFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLASKPISNFYRSPEMSDSVEFAVDVSTSIESIGALKAKLKAYLESKPQHWRPNHIVLVKDIKNVNKITMRLRVTHTISFQNYGDRNSRRSELVLELKKILEDLNIKYHLLPQEIHISYVRSEDSTARTF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01678 323 FunFam Predicted mechanosensitive ion channel 154 203 - -
Pumo2g01678 323 SUPERFAMILY Sm-like ribonucleoproteins 144 203 IPR010920 -
Pumo2g01678 323 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 29 313 IPR016688 -
Pumo2g01678 323 Pfam Mechanosensitive ion channel 97 300 IPR006685 GO:0016020|GO:0055085
Pumo2g01678 323 Gene3D - 154 203 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01678 Pumo-Chr2 31503001 31512260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01678 29 311 Mechanosensitive Ion Channel Family AT5G12080 57.244 7.98e-120 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01678 K22048 - gmx:100777332 514.227