Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01674 ATGCTTACGTGCATAGCACGTCCCAAGAAACTCGCTGCTGGGGACTCGGCGAGTGACGATCCGAGTTCGCGGAGCCAGCAGCAGGGAGTCAAGTCGCTGACGTGTCAGCTAAAGGAGATGGCGCTGAAGGCGTCGGGGGCGTACAAGCAGTGCGGCGGTCCGTGCGCCACGGCGCCGAGTCGACTCAGCCGCGGCGGCGGCGGAGGCGGCGAGTCGGACTCGGACTCGTCGTCGCGGCGGCGGTGGGGGAAGGAGCTGGAGGCGCGGCTGAAGGGGATATCGAGCGGGGAGGGGACGCCGAGCTCGAGCGGAAGGAGGGTGGTGCTGCTGCTGGAGGAGGAGGAGGAGCCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCGCGTGGCGGGAACCATCTCAAACGGATACGATTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAGGTGATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCCGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGATTTCCCTGTGACACCTCCACTGAGCAGGGAAAGGCCACCTTGTAATTTATACCGTGCAGGAGGAGGAGGAGGAGGGATGGGAATGGGGTACTCATCCTCAGATTCGTTTGATCACCAGTCAATGCAGTCCCGGCATTACTATGACCCTAATGGTGTGAACTCAACCCCAAAGGCTTCCACCATTAGTGCTGCTGCCAAGACAGATATCTCATCAATGGATGCTGATGCTTCTATAAGAAGTAGCTCATCCAGAGAAGCTGATCGCTCTGGGGACCTATCAATCAGCAATGCCAGTGACCTTGACACTGAATGGGTTGAGCAGGATGAACCTGGGTTTACATCACCATCAGAGCTCTCCCAGGTGGCAAAAAAGAGCTCAGACGAGTAA 993 0.566 MLTCIARPKKLAAGDSASDDPSSRSQQQGVKSLTCQLKEMALKASGAYKQCGGPCATAPSRLSRGGGGGGESDSDSSSRRRWGKELEARLKGISSGEGTPSSSGRRVVLLLEEEEEPKEWVAQVEPGVLITFVSLPRGGNHLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEDFPVTPPLSRERPPCNLYRAGGGGGGMGMGYSSSDSFDHQSMQSRHYYDPNGVNSTPKASTISAAAKTDISSMDADASIRSSSSREADRSGDLSISNASDLDTEWVEQDEPGFTSPSELSQVAKKSSDE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01674 330 ProSiteProfiles BRX domain profile. 118 173 IPR013591 -
Pumo2g01674 330 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 314 IPR044532 -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 1 31 - -
Pumo2g01674 330 Pfam Transcription factor regulating root and shoot growth via Pin3 118 172 IPR013591 -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 268 330 - -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 183 256 - -
Pumo2g01674 330 Pfam Transcription factor BRX N-terminal domain 24 52 IPR027988 -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 234 256 - -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 55 83 - -
Pumo2g01674 330 MobiDBLite consensus disorder prediction 289 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01674 Pumo-Chr2 31445654 31452114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01674 1 313 Major Intrinsic Protein MIP AT1G31880 38.824 2.66e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01674 - - gmx:100791360 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01674 2 31445654 31452114 Pumo2g01674 2 31445654 31452114 ECH
Pumo4g00661 4 8657833 8663544 Pumo2g01674 2 31445654 31452114 PCT