Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01665 ATGAAGAAAGGGAGCATAAGCTCCGGTCTCAAACTCACTGTTCCTGCTGCATCTGATCGGGGTTCATTTACCAAGTTCCTGTCTGAGCCTGAAAGTGGAACGTTTAAGGCTGGAGACTTGCTTGTCAATAAGGAAGGAGTTCGAATTGTCTCTGAGAATGAAGTGGAAGCTCCGCCCCCAATCAGGCCACTAGACAACCAGTTAAATTTGGCAGACATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGAATAGTGCAATTGGTGCAACACAAATGGACAAATCAGTTTTTTGCATTAAAGGAAATTCAAATGACTATTGAGGAGCCTATCCGCAGGCAGATAGCACAAGAGCTAAAAATTAATCAATCAGCACAATGTCCCTATGTTGTTGTCTGCTACCATTCATTCTATCATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAAGATCTTCTGAGCAATGTTAAAACAATTCCAGAGTCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGTATCTTCACCATGAAAAACATATTATCCATAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGCCAGAGAGAATCATGGGTAACCAGCATGGCTACAACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTGCTCAAGTGTGCTACAGGGCAGTTTCCATATACACCACCGGATCAACGCGAAGGATGGGACAATATTTTCCAGCTTATTGAAGTCATTGTGGAAAAACCTTCCCCCAGTGCTCCATCAGATGATTTTTCTCCACAATTTTGCTCATTTGTAACAGCATGTTTACAGAAAGATCCAAGGGATAGACCGTCAGCTCGAGACCTTATAAATCACCCTTTTATCAACATGTATGAGGACTTAAATGTGGATCTTTCAGCTTATTTCTCCAACGCAGGATGTACACTTGCAACCATATAG 990 0.4141 MKKGSISSGLKLTVPAASDRGSFTKFLSEPESGTFKAGDLLVNKEGVRIVSENEVEAPPPIRPLDNQLNLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKEIQMTIEEPIRRQIAQELKINQSAQCPYVVVCYHSFYHNGVISIILEYMDGGSLEDLLSNVKTIPESYLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEPERIMGNQHGYNYKSDIWSLGLILLKCATGQFPYTPPDQREGWDNIFQLIEVIVEKPSPSAPSDDFSPQFCSFVTACLQKDPRDRPSARDLINHPFINMYEDLNVDLSAYFSNAGCTLATI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01665 329 CDD PKc_MAPKK_plant_like 71 309 - -
Pumo2g01665 329 Gene3D Transferase(Phosphotransferase) domain 1 151 210 - -
Pumo2g01665 329 Gene3D Transferase(Phosphotransferase) domain 1 211 325 - -
Pumo2g01665 329 FunFam Mitogen-activated protein kinase kinase 6 43 152 - -
Pumo2g01665 329 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Pumo2g01665 329 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 12 208 - -
Pumo2g01665 329 SUPERFAMILY Protein kinase-like (PK-like) 71 311 IPR011009 -
Pumo2g01665 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Pumo2g01665 329 SMART serkin_6 73 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01665 329 ProSiteProfiles Protein kinase domain profile. 73 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01665 329 Pfam Protein kinase domain 75 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01665 329 Pfam Protein kinase domain 209 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01665 329 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01665 Pumo-Chr2 31302680 31307303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01665 31 323 MAP Kinase Kinase Gene Family AT4G26070 59.133 3.48e-142 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pumo2g01665 Pkinase 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01665 K20603 - gmx:100789241 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01665 2 31302680 31307303 Pumo2g01665 2 31302680 31307303 ECH
Pumo4g00673 4 8770134 8775084 Pumo2g01665 2 31302680 31307303 PCT