Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01660 ATGGAGAATCACAGGGTGGAGGAATCGGTGCATGTGAGGGAGGAGGATGATGACGTGGCGGCGGAGAAAGAGGAGGATCAAGGAGATGTTGGTTCCAGCATGACCTTGGAGAGGGTTGCTGCAGCTAAGAAATTCATTGAGAACCATTACAGGGCTCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGTTCAATGCTAGAACAGAAGTTAGCGTCTTCTCAAGTACCAGAAGAGGAACAGATCAATCTATTGAAGGATTTAGAGCGCAAGGAAACTGAGTATATGCGGTTAAAAAGACATAAAATATGCGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGAGAGGTAAGACTCTGCCGGGAAAAGAAATCGGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTTAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCTGTGACTGCATTGTTAAACTCTATTACTCTTTTCAAGATGCTGAACACTTATATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAAAGCGTTTTGGCCATAGAGTCTATTCATAAACACAACTACATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACCAAAATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTCGACTGCTCTAGTCTATCATCTATTAATGAAAATGAAATCCTGGATGATGAGAACTTGAATGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCGCCTGAAGTATTACTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTACGAAATGCTAGTTGGATATCCTCCATTTTACTCTGATGATCCTGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTGAAATTTCCAGAAGAGGCCAGATTGACACCTGAAGCCAAGGATCTAATATGCGGGTTGCTTTGTGGTGTTCCACATAGACTTGGTACTAGAGGAGCAGACGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATGTGGGAAAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAACAACAACTAGAACCGGATCTGGAGCCATCAGAAAGAAGCTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGCGTCAATCTAATAATGATACAGGGAGCTTGTCACCAAAGCGAACATCTGTTGACTCCACACACAGTGATTCTTCGGTAAACTATTCCACCTGA 1557 0.4194 MENHRVEESVHVREEDDDVAAEKEEDQGDVGSSMTLERVAAAKKFIENHYRAQRKHIQERKERRSMLEQKLASSQVPEEEQINLLKDLERKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVACDCIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDCSSLSSINENEILDDENLNDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEARLTPEAKDLICGLLCGVPHRLGTRGADEIKAHPWFKDVMWERLYEMEAAFKPQVNGELDTQNFMKFDEVEQPTTTRTGSGAIRKKLLTSQDLSFVGYTYKNFAAVKGMRQSNNDTGSLSPKRTSVDSTHSDSSVNYST 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01660 518 ProSiteProfiles Protein kinase domain profile. 108 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01660 518 CDD MobB_NDR_LATS-like 42 103 - -
Pumo2g01660 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 469 - -
Pumo2g01660 518 SUPERFAMILY Protein kinase-like (PK-like) 91 459 IPR011009 -
Pumo2g01660 518 Pfam Protein kinase domain 308 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01660 518 Pfam Protein kinase domain 110 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01660 518 MobiDBLite consensus disorder prediction 1 18 - -
Pumo2g01660 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pumo2g01660 518 Gene3D Phosphorylase Kinase; domain 1 99 193 - -
Pumo2g01660 518 MobiDBLite consensus disorder prediction 489 518 - -
Pumo2g01660 518 FunFam Non-specific serine/threonine protein kinase 69 191 - -
Pumo2g01660 518 Gene3D Transferase(Phosphotransferase) domain 1 194 432 - -
Pumo2g01660 518 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Pumo2g01660 518 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo2g01660 518 FunFam Non-specific serine/threonine protein kinase 434 444 - -
Pumo2g01660 518 SMART serkin_6 108 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01660 518 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Pumo2g01660 518 CDD STKc_NDR_like 106 480 - -
Pumo2g01660 518 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Pumo2g01660 518 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo2g01660 518 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01660 Pumo-Chr2 31216479 31229589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01660 1 517 AGC Kinase Gene Family AT2G19400 74.521 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pumo2g01660 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01660 K08790 - gmx:100811359 965.681