Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01652 ATGGAACCTCGCGTTGGGAATAAGTTTCGGCTTGGCCGTAAGATCGGTAGCGGATCGTTTGGGGAGATCTATTTAGGTACTAATATTCAAACTAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTATATGAGTCCAAGTTGTACAGAGTTCTCCAGGGAGGAACTGGAATTCCAGATGTTAGATGGTTTGGAGTGGAGGGAGAATACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCATTTCTACATCGGGATATCAAACCAGATAATTTCCTCATGGGCTTGGGAAGGCGGGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCGAAGAAATATAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTAACTGGGACTGCTAGATATGCAAGTATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTGGAGTCTCTTGGTTATGTCTTGATGTATTTCTTGAGAGGAAGTCTCCCTTGGCAAGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAGGATCAGTGAAAAAAAGGTTTCTACCTCAATTGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGTTCATTAAGGTTTGATGATAGGCCGGATTATGCTTACCTCAAAAGAATATTTCGCGACCTGTTTATTCGTGAAGGATTCCAGTTTGACTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTAGCCGCTCCTCCAGCACGTGCCATTGGTCCTAATGCTGGAACTAGTTCTGCAATGCCACCGGCTGTTACTAATGCTGATAGACAGACAGGAGAGGAAGAAGGGCGAGCTCCTGGTCTGGTTTCAGGGGATTCCACAAGGCGAAGAATGTCAGGGCCCATCTCAAACTCTGTAAATATTTCAAAGCAGAAAAATCCAGTCACCACGGATGCTGCCCTTAATAAGGAAGCCATGTTATCTAGGCCAAATGTCTTGGGCCAGTCAAGTGGATCAAGGCGAGCTGCTGTTTCTAGTAGCCGCGATGCATTTGTTGGTGCTGATTCGGATCTTCGTACTCGTACTACTGAGGCTAACCCTGCAACAGCGCGCAAAACATCATCTGGGAGAAACGCTTCCCATGTCAAGAACTATGAAACTGCAGTCAAGGGCATTGAGGGTTTGCAATTAGAAAATGATGAGAGGACCCTCTATTAA 1371 0.434 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARAIGPNAGTSSAMPPAVTNADRQTGEEEGRAPGLVSGDSTRRRMSGPISNSVNISKQKNPVTTDAALNKEAMLSRPNVLGQSSGSRRAAVSSSRDAFVGADSDLRTRTTEANPATARKTSSGRNASHVKNYETAVKGIEGLQLENDERTLY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01652 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Pumo2g01652 456 MobiDBLite consensus disorder prediction 382 431 - -
Pumo2g01652 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pumo2g01652 456 FunFam Putative Casein kinase I 1 85 - -
Pumo2g01652 456 MobiDBLite consensus disorder prediction 306 360 - -
Pumo2g01652 456 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01652 456 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01652 456 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Pumo2g01652 456 FunFam Casein kinase I isoform delta-like 1 308 - -
Pumo2g01652 456 MobiDBLite consensus disorder prediction 410 431 - -
Pumo2g01652 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pumo2g01652 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01652 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pumo2g01652 456 PANTHER CASEIN KINASE-RELATED 9 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01652 Pumo-Chr2 31118561 31128578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01652 7 214 CBL-interacting serine-threonine protein kinases AT5G58380 28.511 1.66e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pumo2g01652 Pkinase 4.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01652 K02218 - gmx:100786777 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01652 2 31118561 31128578 Pumo2g01652 2 31118561 31128578 ECH
Pumo4g00684 4 8879321 8885213 Pumo2g01652 2 31118561 31128578 PCT