Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01641 ATGGCTGAAGTTGATAAACTAAGCAAAAGGAATCAAGGGTTGACGTCACTTTTGCCACCCAAAGAATCTACAACTGAAGAAACCATGGAAGCTAGTTTATCACCAAATGAAAGATTAAGTGTCCGAATTTCACATGTACCCGAATCAAGCTCATCAGAAGAGAGAATGGTGGACTTGCAAGTGAATGTGAGAGGACAAGTTTCTCAAATTGATTTATTGATTCGCTTATTGGAATTCTTAAAACGGGGTCACCACGTGAGCTTGGTTTCCATGGATGCAACAAACACCCACATTGCAGAAGGGAATAATACTCTTCATCAACTAACCTTCAGATTAAGGATCATTCAGGGAACTGAATGGGACGATTCTGCCTTCGAGGAAGCAGTGAGAAGAGTAGTTGCTGACTTGGCACACTACCAAGTGGACCAATAA 432 0.4144 MAEVDKLSKRNQGLTSLLPPKESTTEETMEASLSPNERLSVRISHVPESSSSEERMVDLQVNVRGQVSQIDLLIRLLEFLKRGHHVSLVSMDATNTHIAEGNNTLHQLTFRLRIIQGTEWDDSAFEEAVRRVVADLAHYQVDQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01641 143 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 2 135 IPR044658 -
Pumo2g01641 143 MobiDBLite consensus disorder prediction 1 38 - -
Pumo2g01641 143 MobiDBLite consensus disorder prediction 9 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01641 Pumo-Chr2 30964036 30966955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01641 2 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 48.551 5.13e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01641 - - gmx:100807098 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01641 2 30964036 30966955 Pumo2g01641 2 30964036 30966955 ECH
Pumo4g00692 4 8971441 8975204 Pumo2g01641 2 30964036 30966955 PCT