Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g01637 | ATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGATGAGTACCTTCTCCCACGCAGTTATATAACTGGGTACCAAGCTTCAAAGGACGATCTTACTGTTTATGCAGCTTTGCCAACTGCTCCATCAGATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTCATGCCTTGTTGAGAATATCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTGAGGGATCTCTTGTTGCGGAGCCTGTTGCAACTCCCCCAGCTGCTGACACAAAGGCTGCTGCGGCTGAGGATGACGACGATGATGATGTGGATCTCTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCTGCAGTGAAGGCATCTTCAAAAAAGAAAGAGTCTGGAAAGTCATCTGTTCTGTTGGATGTGAAACCATGGGATGATGAAACCGACATGAAGAAGCTTGAGGAAGCAGTGAGATCTGTTCAGATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCCGTTGGGTACGGTATCAAGAAACTGCAAATTATGCTTACTATTGTGGATGACCTAGTTTCTGTCGACAATCTTATTGAGGAATATCTCACAGTCGAGCCCATCAATGAATATGTCCAAAGTTGTGACATTGTGGCCTTCAATAAAATTTAA | 693 | 0.4574 | MAVTFYDLSSASGLKKLDEYLLPRSYITGYQASKDDLTVYAALPTAPSDEYVNVSRWYKHIHALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEYVQSCDIVAFNKI | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g01637 | 230 | SMART | EF1_GNE_2 | 141 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Pumo2g01637 | 230 | Coils | Coil | 113 | 133 | - | - | |
Pumo2g01637 | 230 | Gene3D | - | 134 | 230 | IPR014717 | - | |
Pumo2g01637 | 230 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 105 | 113 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Pumo2g01637 | 230 | MobiDBLite | consensus disorder prediction | 87 | 109 | - | - | |
Pumo2g01637 | 230 | FunFam | Elongation factor 1-delta 1 | 3 | 78 | - | - | |
Pumo2g01637 | 230 | Gene3D | - | 4 | 78 | - | - | |
Pumo2g01637 | 230 | Pfam | EF-1 guanine nucleotide exchange domain | 143 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Pumo2g01637 | 230 | SUPERFAMILY | GST C-terminal domain-like | 11 | 68 | IPR036282 | - | |
Pumo2g01637 | 230 | CDD | EF1B | 144 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Pumo2g01637 | 230 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 219 | 230 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Pumo2g01637 | 230 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 8 | 230 | - | - | |
Pumo2g01637 | 230 | FunFam | Elongation factor 1-beta 1 like | 135 | 230 | - | - | |
Pumo2g01637 | 230 | SUPERFAMILY | eEF-1beta-like | 138 | 230 | IPR036219 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g01637 | Pumo-Chr2 | 30893202 | 30895818 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g01637 | 5 | 230 | Eukaryotic Initiation Factors Gene Family | AT2G18110 | 81.140 | 4.66e-115 | 327 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g01637 | K03232 | - | gmx:100777627 | 343.969 |