Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01624 ATGCCTCTCCGAGTACTCCAAGCAGAGGCTACTCCACCCTCTAATGAGTCACATGCAGCACTGCACAAATCCGGATCATTGTTTTACATCCTCGGAGGAATAGTTGTGCTTGCCATAGTATCGATTTTTTTATATGTATGTAAGAAGTGTATTAAACGGCCAGCGCAGACGATGACAGTTGCAACCAAAGAGCAGCAAGCATATGAGAAACATAATGAATCGGCAGAGGTGATGAAGATGATATTTTCATCTAATCAACAATCAGGGTCTAAGGAGTTCTTTAGTGGGAACCTTAGGACAATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCAAGAACTTCCATCCTGATAATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAGAGTTGGTAGATGGAAGGCTAGTTGCGGTTAAGAAATTGGCTCTCAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAGAAATCTGGTTCGCCTTCTCGGATGCTGCATAGATGGGCCTCAAAGGATACTTGTCTATGAATACTTGAAGAACAGAAGTTTGGACCTCTTCATACATGTTAAAGAGACTTCCATTGATAATTATGAGAACGAGACTCACATATTTAGGGAGACCAACATGATAGCACAACAGAAAAAACATATCCCAAAGCTGAGACAACATGGATTCGTAGAAAAGGATGTCATGCAAGCAATCCACGTGGCTTTCTTGTGTCTTCAGCCTCATGCACATTTGAGACCTCCCATGTCAGAGATCGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCGAAGGCCAAGAAAGGATGGTGAGAACCATTCTTTGGAACCATTATCCCAGGATTTCACATCTCCCATATAG 942 0.4246 MPLRVLQAEATPPSNESHAALHKSGSLFYILGGIVVLAIVSIFLYVCKKCIKRPAQTMTVATKEQQAYEKHNESAEVMKMIFSSNQQSGSKEFFSGNLRTISCFDYQTLKKATKNFHPDNLLGSGGFGPVYQGELVDGRLVAVKKLALNKSQQGEKEFLVEVRTITSIQHRNLVRLLGCCIDGPQRILVYEYLKNRSLDLFIHVKETSIDNYENETHIFRETNMIAQQKKHIPKLRQHGFVEKDVMQAIHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDGENHSLEPLSQDFTSPI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01624 313 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 229 296 - -
Pumo2g01624 313 Gene3D Phosphorylase Kinase; domain 1 59 192 - -
Pumo2g01624 313 FunFam Cysteine-rich receptor-like protein kinase 10 80 192 - -
Pumo2g01624 313 Pfam Protein tyrosine and serine/threonine kinase 120 224 IPR001245 GO:0004672|GO:0006468
Pumo2g01624 313 ProSiteProfiles Protein kinase domain profile. 116 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01624 313 SUPERFAMILY Protein kinase-like (PK-like) 95 286 IPR011009 -
Pumo2g01624 313 MobiDBLite consensus disorder prediction 289 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01624 Pumo-Chr2 30597307 30601474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01624 34 210 Trihelix Transcription Factor Family AT1G68690 36.898 6.24e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g01624 PK_Tyr_Ser-Thr 2.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01624 - - gmx:100791042 358.607