Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01617 ATGGCAGTAGATATGATAGAGGTTGTTCCCAGAACGAGGATGGAGGAACAGATAGCAATACAAGAAGCAGCTTCTGCTGGGTTAAAGAGCATGGAGCATCTCATTCGACTCCTTTCTCCCTCTTCTTGCAACAACAACAACAACAACTCTGCCTCTTCTTCTTCTTCTTCTTTTCTTCACAACAACGTTAATCTAAACAACCTCGACTGCTCCGAAATCACCGACTTCACCGTCTCCAAGTTCAAACAGGTCATCAACCTTCTCAACCGCACCGGCCACGCCCGCTTCCGCCGCGCACCACCCCAGGCCCAGGCCCAGGCCCAACCAGAACCACAACCTCAACCTCAGACCCAACAACAAGGCTTCACTTTAGACTTCGTTAAGCCCACCATTCTAAACTCAAAGCCCAGCAACAAAGACGAGACTTTGACCCTCTCCAACACCTCCTCCTCCTTCATGTCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCATCCGCTGCCAAACCCCCTCTCTCCACCGCTCACCGGAAAAAGTGCCGCGACGCCGCCGTCCTCTCCGCCAAACCCTCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAACGAACGATTCGTGTGCCGGCGATAAGTTCCAAGATCGCCGATATCCCGCCGGACGAGTACTCGTGGAGAAAATACGGTCAAAAACCGATCAAGGGCTCACCTTACCCTCGAGGGTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGCGCGCAAGATGACCCCAAGATGCTCATAGTGACCTACGAGGGTGAGCACCGTCACGCGCTGCCGTTAAATGCCGATGACGGCGTTAGTTTCGGCCTTTAA 903 0.546 MAVDMIEVVPRTRMEEQIAIQEAASAGLKSMEHLIRLLSPSSCNNNNNNSASSSSSSFLHNNVNLNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPPQAQAQAQPEPQPQPQTQQQGFTLDFVKPTILNSKPSNKDETLTLSNTSSSFMSSVTNDASVSDGKIGPFLPPSAAKPPLSTAHRKKCRDAAVLSAKPSSCHCSKKRKSRVKRTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLNADDGVSFGL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01617 300 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g01617 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 289 IPR044810 GO:0003700
Pumo2g01617 300 SUPERFAMILY WRKY DNA-binding domain 226 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g01617 300 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g01617 300 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g01617 300 Pfam Plant zinc cluster domain 185 226 IPR018872 -
Pumo2g01617 300 Gene3D WRKY domain 213 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g01617 300 MobiDBLite consensus disorder prediction 97 119 - -
Pumo2g01617 300 FunFam WRKY transcription factor 65 212 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01617 Pumo-Chr2 30491156 30493369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01617 1 286 WRKY Transcription Factor Family AT2G24570 51.524 9.42e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo2g01617 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01617 - - gmx:100127391 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01617 2 30491156 30493369 Pumo2g01617 2 30491156 30493369 ECH
Pumo4g00725 4 9382803 9384558 Pumo2g01617 2 30491156 30493369 PCT