Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01604 ATGAGTTTCCTGAACGGTCCTTCACCGCGGCGGAACTCGGCGGAGAGTGACATAGAGGCCGGTAACTCCACTCGCCGCTCCGCCGACCTCGACGACGGCGATTTCTCCGATCCCTTTGATATTGCCAGGACCAAGAACGCTTCGATTGAACGCCTCAGACGCTGGAGGCAAGCAGCGCTTGTGCTTAATGCTTCTCGACGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAGCAAATATTGAGAAAGATTAGAGCGCATGCACAAGCCATTAGAGTACGGTTCCTTCAATTGGACTTCCTTTATTATGCTTATGCTAGACTTGCTAGGCGGCTTATCTTTTCAAAGCAGCTGGTGGGGGGCCAGGGAGTGAACCTATTAAACCTCCTCCAGGTCCCCACTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAATTTCAAGGGAGCATGACACTGCTGCTCTGCAACAATATGGAGGGGTTGTAGGAGTATCAAATTTGTTGAAAACCAATTTAGAGAAGGGTATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAACAATTATCCTCGGAAGAAAGGAAGAAGTTTTCTGATGTTTATGTGGGATGCTTGCAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGTGGCTTCATTGGCACTTGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTCCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTGTTAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGATATTGTTGTTGGGGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTGTCATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCACAAGGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACGATGCTGGTCACTGGTGTTGGTATCAATACTGAATGGGGGCTTCTAATGGCTAGCATCTCAGAAGATACTGGCGAAGAAACACCATTGCAGGTTCGCTTAAATGGTGTAGCTACTTTCATCGGCATTGTAGGACTCTCCGTTGCTGTTGTTGTCCTGATTGTGCTACTGGCTAGATATTTCTCTGGGCATACTGAAAACCCGGATGGGTCGGTTCAATTTAAAGCAGGCAAGACTAAAGTTGGTGATGCTATTGATGGTGCAATTAAGATAGTAACTGTTGCGGTCACCATCGTAGTGGTTGCAGTACCAGAGGGGCTCCCATTAGCAGTTACTTTAACGCTGGCCTACTCGATGAGAAAAATGATGACAGATAAAGCTTTGGTAAGGAGGCTTTCTGCCTGTGAGACCATGGGCTCTGCCACAACCATATGTAGTGATAAGACTGGCACATTGACTATGAATCAGATGACTGTGGTTGAGGCTTACGCTGGGGGTAAGAAAATTGATCCTCCTCACAAGCTGGAGTCCTATCCTATGCTTCGCTCTCTGCTCATTGAAGGTGTTGCACAGAACAGTAATGGCAGTGTTTATGCACCTGAGGGTGCGAATGATGTCGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACAATGGGGAATACAGATTGGGATGAATTTTACTGCTGCTCGATCTGAATCATCAATTATTCATGTTTTTCCATTCAATTCAGAGAAAAAAAGAGGCGGAGTTGCATTACAAACGGCTGACCATAACATCCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTTCAGGCTATATTGATGCAAATGACCAGCTGGTGGGGATGGATGAGGAGAAGATGACATTTTTCAAAAAAGCTATTGAAGACATGGCTGCTGATAGTCTACGTTGTGTTGCCATTGCATATAGATCATATGAAAAAGAGAAAGTTCCAAGTAATGAAGAACTACTTGCTCACTGGTCTTTACCAGAGGATGATCTTATTTTACTAGCTATTGTTGGTATTAAGGATCCTTGTCGAACTGGTGTCAAAGAAGCAGTGCAACTTTGCCAAAAAGCTGGGGTTAAGGTGAAAATGGTCACTGGTGATAATGTGAAAACTGCAAAAGCAATTGCTGTGGAATGTGGAATACTTAATTCATTAGCTGATGCTACAGAGCCAAACATCATTGAAGGGAAAAGATTTCGTGGCTTGTCAGATGCAGAGAGAGATGAAATTGCTGACAGGATATTGGTCATGGGACGGTCAGCTCCCAATGACAAACTATTGTTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTGGCTGTAACTGGGGATGGAACAAATGACGCTCCTGCACTTCATGAGGCCGATATAGGTCTTGCAATGGGTATCCAAGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCAGCTCTAGTGATAAATGTTGTTGCTGCAGTTTCAACTGGTGATGTTCCATTAAATGCAGTGCAGCTTCTTTGGGTAAATCTTATCATGGATACTCTGGGAGCACTAGCCCTGGCAACTGAACCACCAACTGATCACCTCATGGATCGATCTCCAGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTACCAAGTATCCGTCTTGCTTATACTCAATTTCCGAGGCATAAGCATACTGGGTCTGAGCCATGACAAAAAGGACCATGCTATCGAAGTGAAGAACACTTTGATATTCAATGCATTTGTTCTCTGTCAAATCTTTAATGAATTTAATGCTCGAAAGCCAGATGAATTCAACATATTTAAAGGAGTCACGAGAAACTACCTCTTTATGGGTATCATTGGATTAACTGTTGTGCTTCAGATTGTCATCATTGAATTTCTTGGCAAGTTTACAACGACAGTGAGGCTTAATTGGAAGCAGTGGCTCATCTGTGTCATTATTGGGTTGATTGGTTGGCCTCTTGCTGTGATTGGGAAATTGATACCAGTGCCAACAACTCCCATCAACAACGTTTTTTCAAAATTTCGAGGTTCTTCTACAAGGGAACCTGAGGAATCTCAGTAG 3306 0.4316 MSFLNGPSPRRNSAESDIEAGNSTRRSADLDDGDFSDPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRVRFLQLDFLYYAYARLARRLIFSKQLVGGQGVNLLNLLQVPTAGEFPIGQEQLASISREHDTAALQQYGGVVGVSNLLKTNLEKGIHGDDADLLKRRNAFGSNNYPRKKGRSFLMFMWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVVRGGRRVEISIYDIVVGDVIPLNIGNQVPADGIVITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLARYFSGHTENPDGSVQFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMTDKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPHKLESYPMLRSLLIEGVAQNSNGSVYAPEGANDVEVSGSPTEKAILQWGIQIGMNFTAARSESSIIHVFPFNSEKKRGGVALQTADHNIHIHWKGAAEIVLACCSGYIDANDQLVGMDEEKMTFFKKAIEDMAADSLRCVAIAYRSYEKEKVPSNEELLAHWSLPEDDLILLAIVGIKDPCRTGVKEAVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILNSLADATEPNIIEGKRFRGLSDAERDEIADRILVMGRSAPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSTGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLILNFRGISILGLSHDKKDHAIEVKNTLIFNAFVLCQIFNEFNARKPDEFNIFKGVTRNYLFMGIIGLTVVLQIVIIEFLGKFTTTVRLNWKQWLICVIIGLIGWPLAVIGKLIPVPTTPINNVFSKFRGSSTREPEESQ 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01604 1101 NCBIfam calcium-translocating P-type ATPase, PMCA-type 154 1077 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo2g01604 1101 Pfam Cation transporter/ATPase, N-terminus 164 231 IPR004014 -
Pumo2g01604 1101 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 79 IPR024750 GO:0005516
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 705 858 - -
Pumo2g01604 1101 SUPERFAMILY HAD-like 504 918 IPR036412 -
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 9 plasma membrane-type 360 530 - -
Pumo2g01604 1101 CDD P-type_ATPase_Ca_PMCA-like 188 946 - -
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 516 713 - -
Pumo2g01604 1101 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 718 IPR023299 GO:0000166
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 830 1079 - -
Pumo2g01604 1101 Gene3D - 187 382 - -
Pumo2g01604 1101 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 1077 IPR023298 -
Pumo2g01604 1101 Pfam haloacid dehalogenase-like hydrolase 503 827 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 728 738 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 706 717 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 813 832 - -
Pumo2g01604 1101 PRINTS P-type cation-transporting ATPase superfamily signature 837 849 - -
Pumo2g01604 1101 SFLD p-type atpase 488 865 IPR044492 -
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 47 101 - -
Pumo2g01604 1101 SFLD Haloacid Dehalogenase 488 865 - -
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 214 271 - -
Pumo2g01604 1101 SUPERFAMILY Calcium ATPase, transduction domain A 284 379 IPR008250 -
Pumo2g01604 1101 Pfam E1-E2 ATPase 284 484 - -
Pumo2g01604 1101 PANTHER CATION TRANSPORTING ATPASE 131 1077 - -
Pumo2g01604 1101 NCBIfam HAD-IC family P-type ATPase 447 529 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g01604 1101 NCBIfam HAD-IC family P-type ATPase 780 893 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g01604 1101 MobiDBLite consensus disorder prediction 1 21 - -
Pumo2g01604 1101 Gene3D - 503 858 IPR023214 -
Pumo2g01604 1101 Gene3D - 516 713 IPR023299 GO:0000166
Pumo2g01604 1101 Gene3D - 214 1064 - -
Pumo2g01604 1101 SMART Cation_ATPase_N_a_2 162 236 IPR004014 -
Pumo2g01604 1101 FunFam Calcium-transporting ATPase 261 382 - -
Pumo2g01604 1101 Gene3D - 47 102 - -
Pumo2g01604 1101 Pfam Cation transporting ATPase, C-terminus 898 1075 IPR006068 -
Pumo2g01604 1101 PRINTS Sodium/potassium-transporting ATPase signature 249 269 - -
Pumo2g01604 1101 PRINTS Sodium/potassium-transporting ATPase signature 499 520 - -
Pumo2g01604 1101 PRINTS Sodium/potassium-transporting ATPase signature 624 642 - -
Pumo2g01604 1101 MobiDBLite consensus disorder prediction 1 35 - -
Pumo2g01604 1101 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01604 Pumo-Chr2 30250691 30270332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01604 1 1099 Primary Pumps ATPases AT5G57110 72.036 0.0 1587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01604 K01537 - gmx:100792945 1925.6