Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01603 ATGGGTGAATCAAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAGAGGAACGAGGAAGCCAAACAGTACGCAAAGGAATACGACGAGCGGCAAAAGGAGTTGATTAGGTTGAAGCGTGAAGCCAAGCTTAAGGGAGGGTTTTATGTTGAACCCGAAGCTAAGCTCTTGTTCATCATCAGGATCCGTGGTATCAATGCCATGGATCCCAAAACAAGGAAGATTCTGCAGCTTCTTCGTTTGAGACAGATTTTTAATGGCGTCTTTCTTAAAGTGAACAAAGCAACCGTGAATATGCTGCATAGGGTGGAGCCTTATGTTACCTATGGGTACCCTAATTTGAAGAGTGTAAGAGAGTTGATCTACAAGAGGGGCTATGGAAAAGTTAACAAGCAGAGAATTGCTTTGACAGACAACTCTATTATTGAACAGACTTTGGGGAAGCATGGTATCATTTGCATTGAAGATCTGATCCATGAGATCATGACTGTTGGACCTCACTTCAAGGAGGCAAACAATTTTCTATGGCCTTTCAAGCTCAAAGCTCCCCTGGGTGGTTTGGAGAAGAAAAGAAATCATTATGTTGAAGGAGGTGACGCCGGCAACAGGGAGGATTACATAAATGAGCTTATTAGAAGGATGAATTAG 651 0.4347 MGESKALVPESVVKKEKRNEEAKQYAKEYDERQKELIRLKREAKLKGGFYVEPEAKLLFIIRIRGINAMDPKTRKILQLLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVNKQRIALTDNSIIEQTLGKHGIICIEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLEKKRNHYVEGGDAGNREDYINELIRRMN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01603 216 FunFam 60S ribosomal protein L7 57 161 - -
Pumo2g01603 216 FunFam 60S ribosomal protein L7 162 216 - -
Pumo2g01603 216 Gene3D - 162 216 IPR036919 -
Pumo2g01603 216 Gene3D - 57 161 IPR036919 -
Pumo2g01603 216 Pfam Ribosomal protein L30p/L7e 58 108 IPR016082 -
Pumo2g01603 216 Pfam Ribosomal L30 N-terminal domain 21 53 IPR012988 -
Pumo2g01603 216 Coils Coil 12 46 - -
Pumo2g01603 216 NCBIfam 60S ribosomal protein uL30 13 216 IPR005998 GO:0000463|GO:0003735|GO:0022625
Pumo2g01603 216 CDD Ribosomal_L7_archeal_euk 57 216 IPR035808 -
Pumo2g01603 216 SUPERFAMILY Ribosomal protein L30p/L7e 57 216 IPR036919 -
Pumo2g01603 216 PANTHER 60S RIBOSOMAL PROTEIN L7 14 216 IPR039699 -
Pumo2g01603 216 ProSitePatterns Ribosomal protein L30 signature. 76 108 IPR018038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01603 Pumo-Chr2 30181376 30184075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01603 1 216 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 78.099 1.06e-136 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01603 K02937 - gmx:100500011 407.142