Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01559 ATGGAGGGTCAACCTGCTAAACGGAGACGTGTATACTCTCTTGAACCCACCAAAGTGGAACTAGCAGCATTTGCAAGAAACTACATGAACTATTTGGTGCCAGCATTGATGAAGATCAAGGAAAGAAGCACTTCATCAGAACATAGTGGACATTGTGATGATGACATTCAGCATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGTACTCAGCCCAGGGTTTTGCATGGAGCAATGCTCTAAGTGTGAAGCTTCAAAGGGATAGAGCCAATGTAGATAGTGGCACCACTAGCTTTGGTGAAAAGATTAAGGAAGCTGGTGAAGGTTCATCATCAAGGATTTGTGGCCAAAATTGTGAAAAGGTGCCATTGGATAATTTCCCTTCAAACCCTAGTTTGAAGTCTAATAATAAGTACAAGGAAATGTCTGAAAGGAAAAGGGGTTCAAGAGAAGATGATGATGGTGATGAAGATGAAGTCATCAATGGCCAATTGAAGAGCTTAAGAAGGTTGATACCTGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACAGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCTGAGACACATTGA 627 0.4211 MEGQPAKRRRVYSLEPTKVELAAFARNYMNYLVPALMKIKERSTSSEHSGHCDDDIQHVVKYEVDMAMVYSAQGFAWSNALSVKLQRDRANVDSGTTSFGEKIKEAGEGSSSRICGQNCEKVPLDNFPSNPSLKSNNKYKEMSERKRGSREDDDGDEDEVINGQLKSLRRLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01559 208 MobiDBLite consensus disorder prediction 126 159 - -
Pumo2g01559 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 206 IPR044660 GO:0006355
Pumo2g01559 208 MobiDBLite consensus disorder prediction 138 153 - -
Pumo2g01559 208 CDD bHLH_AtIBH1_like 161 205 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01559 Pumo-Chr2 29206677 29207751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01559 7 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 45.570 1.93e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01559 - - gmx:100805301 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00771 4 10099942 10101360 Pumo2g01559 2 29206677 29207751 PCT