Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g01558 | ATGTCGGACAACGCCTCTCCTCAAATAAAGTATGATGTTTTTGTTAGCTTCAGGGGCCAGGACATCCGCAACGGATTTCTTAGCCATTTGATTGAGGCTTTTGAAAGGAAGAAAATAGATGTCTTTGTAGATTATAATCTTGAGAAAGGAGATGAAATATGGCCATCACTTGTCGAAGCAATACAAGGATCATTCATTTCATTGATCATATTCTCACCAGACTATGCTTCTTCTCGTTGGTGTTTAGAAGAACTTGTGACAATACTTGAATGCAGAGAGAACTATGGACGTATTGTAATCCCTGTTTTCTATCATGTAGAACCCACACATGTACGACATCAATGGGGGAGTTACAAAAGTGCTCTTGCAGAGCATGAAAGAAAATATGAGACCAAGGTGCAAATATGGAGACAGGTTTTGAATAAATCTGCTAACTTATCTGGAATTGAGTCATCAAAATTTCCAAATGATGCTGCAGTGCTTAAAGAAATTGTCAATCTGGTACTGAAGAGGTTGGTTAAACCCCATGTTATCTCAAAAGGACTTGTTGGAATTGAAGAGAAAATCACAACTGTAGAATCATGGATAACAAAAGAGCCAAAAGACAACCTTCTTATTGGAATTTGGGGTATGGCCGGTATCGGCAAGACAACCCTTGCAGAAGAAATTTTTAATAAATTACAGTATGAATATGAAGGTTGTTATTTTTTAGCAAATGAAAGAGAAGAATCAAAGAATCATGGAATAATTCCTTTGAAGAAAAAAATATTTTCTGGGCTATTACAATATGATGTGGAAATTTACACAGAAAATTCGTTACCCGATTATATTGTTAGGAGAATTGGCCGTATGACGGTTCTTATTGTTATTGATGACGTGAATGATTTAGATCACTTGGAAAAATTGTTGGGAACTCTTGACAATTTTGGATCAGGTAGCAGAATAATTGTAACAACAAGAGATGAGCAAGTTCTTAAGGCTAAGAAAGTCAAAAAGACATACCATCTTACAGAACTCAGTTTTGATAAAGCACTGGAACTTTTCAAATTGAATGCCTTTAACCAAAGTGATAATCAAAAGGAGTACAATGAGCTATCGCATAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTGTTAAAGTTTTGGCTGGTCTTCTTCATGGAAAAAATAAGGAAGAATGGGAAAGTATGCTAGACAAGCTTAAAAAAATGCCTCCTACAGAAGTTTATGAAGTAATGAAACTGAGTTATGATAGTCTAGATCGCAAAGAGCAACAGATTTTTCTATATCTAGCATGTTTCTTTCTTAGATTGAAAACAACGGTGAATGTGGACGAGCTAAAATCTTTATTGAAAGATAATGAAAGTGATAATTCAGTGTTTTATGGGTTAGAAAGATTGAAGGATAAAGCTCTTATAACTATCTCTAAGGATGGTTTTGTATCTATGCATGATAGTATACAAGAAATGGCATGGGAGATTGTTCGTCGAGAGTCTAGCATATCTGGAAGACACAGTCACTTGTGGGATTCTGATGACATCGCTGAAGCATTGAAAAATGACAAGGGTACTGAAGACATTAGAAGCATACAAATTGACATGCGAAAGATTAAGAAGCAGAAGTTAAGCCCTGACATATTTGCTAAGATGAGCAGATTAAAATTTCTGGAAATCTCTGGGAAATATAATGATGATTTAGTTTATATTCTTGCTGAAGGGCTTCAATTTTTGGAAACTGAGCTAAGATTTCTTTATTGGGATCATTACCCTCTAAAATCATTGCCAGAAAATTTTATTGCCAAAAGGCTTGTAATATTGGAATTTCCATTTGGCAGAATGAAAAAACTTTGGGATGGAGTGCAGAATCTGGTGAATTTAAAAAAAGTTGACCTCACTTCCTCCAATAAGTTAGAGGAGCTCCCAGATTTATCGAAAGCCACAAATCTTGAAGAACTGAAACTCGGGGGTTGTACTGAGTTGACAAGTGTGCATCCATCTATTTTCTCCCTGCCCAAACTTGAGAAATTGATCCTTATTCACTGCAAGTCCCTTACCATAGTCGCAAGCGATTCCCATTTGTGCAGCCTCAGTTATCTCTACCTTCTTTTTTGCGAGAATCTTAGGGAATTCTCACTGATATCAGAGAATATGAAAGAACTAAGATTAGGATGGACGAAGGTGAGAGCATTGCCCTCATCATTTGGACTTCAAAGCAACCTTAAATCACTAGATCTAAGAGGAAGTAAGATTGAGAGGTTACCTTCATCCATCAACAATCTTACGCAACTGTTACATCTAGACATACGTTCTTGCAGGGAGCTTCAAACAATACCGGAGCTTCCCATGTTCCTTGAAACTCTAGATGCTGAATGTTGCACTTCACTTCGAACTCTGCCAGAGCTTCCCCGGTTCCTTAAAACACTAAATATCAGAGAATGCAAATTGCTTCGGACTTTACGGGTGCTTCCCCTGTTCCTTAAAACTCTAGATGCCAGTGAATGCATATCATTGCATACTGTGTTGTTTCCTTCAACGACTATTGAAAAATTAAAGGAAAGCAGTAAACGGGTTCTGTTCTGGAATTGCTTGGACTTGAGTAAATATTCTTTAGTGGCTATTGGGCTGAATGCGCAAATTAATGTGATGAAGTTTGCAAACCAACACCTATCTACACCAAATCACCATCATGTTGAAAATTACAGTGATTATGAAGATAATTATGGTGCTTATCAAGCTGTTTACGTGTACCCGGGAAGCAGTGTTCCACCATGGTTGGAGTACAAGACAAGAAATGATTATATAATTATTGATGTCTCTTCTGCTCCACCTTCCCCCCTCCTCGGTTTCATTTTCTGCTTCGTCTTTGGTGAGCGCACAGACATGAATGGAACACATGAAGTTAGCATCACTATAAGTGATTGCAAGGGTAAAGGTAAAGTGGACAGTGACAGTGACAGAGTCAGAATGTACATAGATTATGGCATTGGGATAATTAAATCAGATCAGGTGTGTGTGATATACGACCAAAGATGTTCTGACTTCATAAATAGCAGAGCCAAAAATCAAACAAGGTTTCAAATCCAGGTTACAATGGGGAGACGATACTTACAATGGGCTGACGATCCAGGTTTAAAAGAATTTGGGGTCAGCCCAATAAGCACCTTGGCATATAACAGTTTCATTCAACAAATGGAATTGCGGTGA | 3207 | 0.3757 | MSDNASPQIKYDVFVSFRGQDIRNGFLSHLIEAFERKKIDVFVDYNLEKGDEIWPSLVEAIQGSFISLIIFSPDYASSRWCLEELVTILECRENYGRIVIPVFYHVEPTHVRHQWGSYKSALAEHERKYETKVQIWRQVLNKSANLSGIESSKFPNDAAVLKEIVNLVLKRLVKPHVISKGLVGIEEKITTVESWITKEPKDNLLIGIWGMAGIGKTTLAEEIFNKLQYEYEGCYFLANEREESKNHGIIPLKKKIFSGLLQYDVEIYTENSLPDYIVRRIGRMTVLIVIDDVNDLDHLEKLLGTLDNFGSGSRIIVTTRDEQVLKAKKVKKTYHLTELSFDKALELFKLNAFNQSDNQKEYNELSHRVVNYAKGIPLVVKVLAGLLHGKNKEEWESMLDKLKKMPPTEVYEVMKLSYDSLDRKEQQIFLYLACFFLRLKTTVNVDELKSLLKDNESDNSVFYGLERLKDKALITISKDGFVSMHDSIQEMAWEIVRRESSISGRHSHLWDSDDIAEALKNDKGTEDIRSIQIDMRKIKKQKLSPDIFAKMSRLKFLEISGKYNDDLVYILAEGLQFLETELRFLYWDHYPLKSLPENFIAKRLVILEFPFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSKATNLEELKLGGCTELTSVHPSIFSLPKLEKLILIHCKSLTIVASDSHLCSLSYLYLLFCENLREFSLISENMKELRLGWTKVRALPSSFGLQSNLKSLDLRGSKIERLPSSINNLTQLLHLDIRSCRELQTIPELPMFLETLDAECCTSLRTLPELPRFLKTLNIRECKLLRTLRVLPLFLKTLDASECISLHTVLFPSTTIEKLKESSKRVLFWNCLDLSKYSLVAIGLNAQINVMKFANQHLSTPNHHHVENYSDYEDNYGAYQAVYVYPGSSVPPWLEYKTRNDYIIIDVSSAPPSPLLGFIFCFVFGERTDMNGTHEVSITISDCKGKGKVDSDSDRVRMYIDYGIGIIKSDQVCVIYDQRCSDFINSRAKNQTRFQIQVTMGRRYLQWADDPGLKEFGVSPISTLAYNSFIQQMELR | 1068 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g01558 | 1068 | Gene3D | Ribonuclease Inhibitor | 497 | 717 | IPR032675 | - | |
Pumo2g01558 | 1068 | ProSiteProfiles | TIR domain profile. | 9 | 172 | IPR000157 | GO:0007165 | |
Pumo2g01558 | 1068 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 11 | 712 | IPR044974 | GO:0006952 | |
Pumo2g01558 | 1068 | Gene3D | - | 175 | 334 | IPR027417 | - | |
Pumo2g01558 | 1068 | SUPERFAMILY | L domain-like | 536 | 850 | - | - | |
Pumo2g01558 | 1068 | Pfam | TIR domain | 10 | 172 | IPR000157 | GO:0007165 | |
Pumo2g01558 | 1068 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 172 | 432 | IPR027417 | - | |
Pumo2g01558 | 1068 | SMART | till_3 | 10 | 146 | IPR000157 | GO:0007165 | |
Pumo2g01558 | 1068 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 2 | 148 | IPR035897 | - | |
Pumo2g01558 | 1068 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 7 | 174 | - | - | |
Pumo2g01558 | 1068 | ProSiteProfiles | Leucine-rich repeat profile. | 626 | 648 | IPR001611 | GO:0005515 | |
Pumo2g01558 | 1068 | Gene3D | Ribonuclease Inhibitor | 718 | 894 | IPR032675 | - | |
Pumo2g01558 | 1068 | SUPERFAMILY | "Winged helix" DNA-binding domain | 408 | 520 | IPR036390 | - | |
Pumo2g01558 | 1068 | Pfam | NB-ARC domain | 186 | 418 | IPR002182 | GO:0043531 | |
Pumo2g01558 | 1068 | Gene3D | - | 5 | 174 | IPR035897 | - | |
Pumo2g01558 | 1068 | PRINTS | Disease resistance protein signature | 205 | 220 | - | - | |
Pumo2g01558 | 1068 | PRINTS | Disease resistance protein signature | 373 | 387 | - | - | |
Pumo2g01558 | 1068 | PRINTS | Disease resistance protein signature | 280 | 294 | - | - | |
Pumo2g01558 | 1068 | PRINTS | Disease resistance protein signature | 622 | 638 | - | - | |
Pumo2g01558 | 1068 | Gene3D | - | 338 | 422 | IPR042197 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g01558 | Pumo-Chr2 | 29177013 | 29181536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g01558 | 11 | 780 | WRKY Transcription Factor Family | AT4G12020 | 32.439 | 4.17e-97 | 337 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g01558 | - | - | gmx:100819060 | 1754.57 |