Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01557 ATGAGATATACCAGGCTTGAAGAATTCAATTTCAACAAAGCACTTGAACTTTTCAATTTGAGTGCCTTTAACCAAAGTGATCATCGGAGGGAGTACAATGAGCTGTCAAAAAGGGTGGTCAATTATGCCCAAGGCATTCCATTAGTTGTTAAAGTTTTGGCTGGCCTTCTTCATGGGAAAAATAAGGAGGAATGGGAAAGTATGCTAGACAAGCTTAAAATAATGCCTCCTACCAAAGTTTATGAAGTAATGAAACTGAGTTACAATGGTCTAGATCGCAAAGGGCAACAGATTTTTCTAGATTTGGCATGTTTCTTTCTTAGAACACAGTGA 333 0.3784 MRYTRLEEFNFNKALELFNLSAFNQSDHRREYNELSKRVVNYAQGIPLVVKVLAGLLHGKNKEEWESMLDKLKIMPPTKVYEVMKLSYNGLDRKGQQIFLDLACFFLRTQ 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01557 110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 102 IPR027417 -
Pumo2g01557 110 Gene3D - 9 92 IPR042197 -
Pumo2g01557 110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 106 IPR044974 GO:0006952
Pumo2g01557 110 Pfam NB-ARC domain 7 76 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01557 Pumo-Chr2 29151895 29152227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01557 6 106 WRKY Transcription Factor Family AT5G45050 36.275 2.38e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01557 - - var:108330137 176.022