Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01555 ATGGAGAAACTTTGGGATGGAGTGAAGAATCTGGTGAATTTAAAAGAAGTTGACCTCACAGGCTGTGAGAACTTAAAGGAGCTGCCAGATTTTTCAAAAGCCAGAAATCTTGAAGTACTAATTCTCGAGTGGTGTCTTATGTTGACTAGTGTGCATCCATCTATTTTCTCTCTGCCCAAACTTGAGAAATTGGACCTTGGGTGGTGCACGTCCCTTACCATACTAGCAAGTGTTTCCCATTTATGCAGCCTCAGTTATCTCAACCTTGATTTTGCGAGAATCTTAGGGAATTCTCAGTGA 300 0.4167 MEKLWDGVKNLVNLKEVDLTGCENLKELPDFSKARNLEVLILEWCLMLTSVHPSIFSLPKLEKLDLGWCTSLTILASVSHLCSLSYLNLDFARILGNSQ 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01555 99 Pfam Leucine Rich Repeat 13 30 IPR001611 GO:0005515
Pumo2g01555 99 Pfam Leucine Rich Repeat 60 74 IPR001611 GO:0005515
Pumo2g01555 99 SUPERFAMILY RNI-like 3 96 - -
Pumo2g01555 99 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 87 - -
Pumo2g01555 99 Gene3D Ribonuclease Inhibitor 1 98 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01555 Pumo-Chr2 29150611 29151005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01555 1 78 WRKY Transcription Factor Family AT5G45050 34.615 5.98e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01555 - - gmx:100817068 133.265